RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 IGLON5A6NGN9 336 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 NEMP1O14524 444 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 ZNF821O75541 412 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-223ENST00000533079 DAB1O75553 588 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 RPLP0P05388 317 aaKnown RBP12.63□□□□□ -0.39
CAPN1-223ENST00000533079 TSHRP16473 764 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 CR2P20023 1033 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 PRCPP42785 496 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 CCNHP51946 323 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-223ENST00000533079 PPARDQ03181 441 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 TYRO3Q06418 890 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 NME3Q13232 169 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 CAMK4Q16566 473 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 CARD16Q5EG05 197 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 FAXCQ5TGI0 409 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 ZNF658Q5TYW1 1059 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-223ENST00000533079 CLEC18BQ6UXF7 455 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 LRRC31Q6UY01 552 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 LINGO4Q6UY18 593 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 RRAGAQ7L523 313 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 DTX1Q86Y01 620 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 KYQ8NBH2 561 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 CLEC18CQ8NCF0 446 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 LMO3Q8TAP4 145 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 ANP32BQ92688 251 aaKnown RBP12.63□□□□□ -0.39
CAPN1-223ENST00000533079 ISG20Q96AZ6 181 aaKnown RBP12.63□□□□□ -0.39
CAPN1-223ENST00000533079 CENPTQ96BT3 561 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 CMKLR1Q99788 373 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 CPEB1Q9BZB8 566 aaKnown RBP12.63□□□□□ -0.39
CAPN1-223ENST00000533079 CLPBQ9H078 707 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 TCEAL2Q9H3H9 227 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-223ENST00000533079 ARHGEF38Q9NXL2 777 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 HOOK1Q9UJC3 728 aaKnown RBP12.63□□□□□ -0.39
CAPN1-223ENST00000533079 TEX15Q9BXT5 2789 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 IGLV3-10A0A075B6K4 115 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 A0A0D9SEW6 157 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 PRAMEF33A0A0G2JMD5 474 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 ILVBLA1L0T0 632 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 DRGXA6NNA5 263 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 PRAMEF10O60809 474 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 CNTN5O94779 1100 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 CALCAP01258 141 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 KRT5P13647 590 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 PNLIPP16233 465 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 GNA15P30679 374 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 OR1E1P30953 314 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 IGFALSP35858 605 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 GGCXP38435 758 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 ABL2P42684 1182 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 PEX5P50542 639 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 HK3P52790 923 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 GEMIN4P57678 1058 aaKnown RBP12.62□□□□□ -0.39
CAPN1-223ENST00000533079 SNX16P57768 344 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 C1QBPQ07021 282 aaKnown RBP12.62□□□□□ -0.39
CAPN1-223ENST00000533079 SRSF6Q13247 344 aaKnown RBP12.62□□□□□ -0.39
CAPN1-223ENST00000533079 C1orf61Q13536 156 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 TAF5Q15542 800 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 ALFQ53S48 1182 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 ZNF805Q5CZA5 627 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 ANKRD40Q6AI12 368 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 SMYD5Q6GMV2 418 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 BORAQ6PGQ7 559 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 ENOSF1Q7L5Y1 443 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 GKN2Q86XP6 184 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 ARHGEF19Q8IW93 802 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 ZNF683Q8IZ20 524 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 PCDH19Q8TAB3 1148 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 ZNF606Q8WXB4 792 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 PPP1R13BQ96KQ4 1090 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 C1orf74Q96LT6 269 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 CEP63Q96MT8 703 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 OSBPL1AQ9BXW6 950 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 FOXP3Q9BZS1 431 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 SIK2Q9H0K1 926 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 EPN3Q9H201 632 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 LRRN3Q9H3W5 708 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 ZDHHC6Q9H6R6 413 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 KIAA1468Q9P260 1216 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 RABGEF1Q9UJ41 708 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 ANAPC2Q9UJX6 822 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 APPL1Q9UKG1 709 aa12.62□□□□□ -0.39
CAPN1-223ENST00000533079 TRPM6Q9BX84 2022 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 A0A1W2PQM1 296 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 C16orf96A6NNT2 1141 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 TMEM110-MUSTN1A8MSY1 372 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 STMND1H3BQB6 276 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 CASC3O15234 703 aaKnown RBP12.61□□□□□ -0.39
CAPN1-223ENST00000533079 THAP12O43422 761 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 ADCY5O95622 1261 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 CTSEP14091 401 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 HGFP14210 728 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 ETFBP38117 255 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 EIF4A3P38919 411 aaKnown RBP12.61□□□□□ -0.39
CAPN1-223ENST00000533079 CASRP41180 1078 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 CCL7P80098 99 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 FOXK1P85037 733 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 ZFP36L1Q07352 338 aaKnown RBP12.61□□□□□ -0.39
CAPN1-223ENST00000533079 KCNAB2Q13303 367 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 CLCA4Q14CN2 919 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 TMEM164Q5U3C3 297 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms