RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 STARD5Q9NSY2 213 aa12.51□□□□□ -0.41
BRF2-204ENST00000522539 APOBEC3BQ9UH17 382 aaKnown RBP12.51□□□□□ -0.41
BRF2-204ENST00000522539 IL17BQ9UHF5 180 aa12.51□□□□□ -0.41
BRF2-204ENST00000522539 IPO11Q9UI26 975 aaKnown RBP12.51□□□□□ -0.41
BRF2-204ENST00000522539 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.51□□□□□ -0.41
BRF2-204ENST00000522539 SNX10Q9Y5X0 201 aa12.51□□□□□ -0.41
BRF2-204ENST00000522539 TLN1Q9Y490 2541 aaKnown RBP12.51□□□□□ -0.41
BRF2-204ENST00000522539 BICDL2A1A5D9 508 aa12.5□□□□□ -0.41
BRF2-204ENST00000522539 C16orf96A6NNT2 1141 aa12.5□□□□□ -0.41
BRF2-204ENST00000522539 PLD2O14939 933 aa12.5□□□□□ -0.41
BRF2-204ENST00000522539 AREL1O15033 823 aa12.5□□□□□ -0.41
BRF2-204ENST00000522539 YY2O15391 372 aa12.5□□□□□ -0.41
BRF2-204ENST00000522539 ENDOD1O94919 500 aa12.5□□□□□ -0.41
BRF2-204ENST00000522539 ITGB2P05107 769 aa12.5□□□□□ -0.41
BRF2-204ENST00000522539 OR1E1P30953 314 aa12.5□□□□□ -0.41
BRF2-204ENST00000522539 SCNN1AP37088 669 aa12.5□□□□□ -0.41
BRF2-204ENST00000522539 GABRB2P47870 512 aa12.5□□□□□ -0.41
BRF2-204ENST00000522539 YPEL5P62699 121 aa12.5□□□□□ -0.41
BRF2-204ENST00000522539 SRSF1Q07955 248 aaKnown RBP eCLIP12.5□□□□□ -0.41
BRF2-204ENST00000522539 SPIDRQ14159 915 aa12.5□□□□□ -0.41
BRF2-204ENST00000522539 PRRT3Q5FWE3 981 aa12.5□□□□□ -0.41
BRF2-204ENST00000522539 LRRC31Q6UY01 552 aa12.5□□□□□ -0.41
BRF2-204ENST00000522539 PASD1Q8IV76 773 aa12.5□□□□□ -0.41
BRF2-204ENST00000522539 TMPRSS4Q9NRS4 437 aa12.5□□□□□ -0.41
BRF2-204ENST00000522539 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.5□□□□□ -0.41
BRF2-204ENST00000522539 GGT7Q9UJ14 662 aa12.5□□□□□ -0.41
BRF2-204ENST00000522539 STAP1Q9ULZ2 295 aa12.5□□□□□ -0.41
BRF2-204ENST00000522539 PADI4Q9UM07 663 aa12.5□□□□□ -0.41
BRF2-204ENST00000522539 PAXBP1Q9Y5B6 917 aa12.5□□□□□ -0.41
BRF2-204ENST00000522539 CHD5Q8TDI0 1954 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 TOR1BO14657 336 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 F9P00740 461 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 TSHRP16473 764 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 SLC5A2P31639 672 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 CDH5P33151 784 aaPredicted RBP12.49□□□□□ -0.41
BRF2-204ENST00000522539 IGFALSP35858 605 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 ADKP55263 362 aaKnown RBP12.49□□□□□ -0.41
BRF2-204ENST00000522539 SNX16P57768 344 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 APBA1Q02410 837 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 GNA12Q03113 381 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 NFATC3Q12968 1075 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 C1orf61Q13536 156 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 MORC3Q14149 939 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 PTK2BQ14289 1009 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 SLC25A52Q3SY17 297 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 ZNF805Q5CZA5 627 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 ISM2Q6H9L7 571 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 KLHL10Q6JEL2 608 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 LVRNQ6Q4G3 990 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 MACC1Q6ZN28 852 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 B3GNT8Q7Z7M8 397 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 HAPLN3Q96S86 360 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 SEMA3CQ99985 751 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 TSPY26PQ9H489 355 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 CLSTN2Q9H4D0 955 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 GRPEL1Q9HAV7 217 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 ATP13A1Q9HD20 1204 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 HECAQ9UBI9 543 aaPredicted RBP12.49□□□□□ -0.41
BRF2-204ENST00000522539 PPARGC1AQ9UBK2 798 aaKnown RBP12.49□□□□□ -0.41
BRF2-204ENST00000522539 APEX2Q9UBZ4 518 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 RABGEF1Q9UJ41 708 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 HOOK1Q9UJC3 728 aaKnown RBP12.49□□□□□ -0.41
BRF2-204ENST00000522539 ITM2BQ9Y287 266 aa12.49□□□□□ -0.41
BRF2-204ENST00000522539 FCF1Q9Y324 198 aaKnown RBP12.49□□□□□ -0.41
BRF2-204ENST00000522539 D6RAR5 112 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 TMX2-CTNND1H3BSU7 103 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 GSRP00390 522 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 ANXA6P08133 673 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 SLC9A1P19634 815 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 CCKBRP32239 447 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 UGT1A5P35504 534 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 CLCN1P35523 988 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 SULT1E1P49888 294 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 THOP1P52888 689 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 PTK2Q05397 1052 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 DEUP1Q05D60 604 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 ARHGAP44Q17R89 818 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 ESRP1Q6NXG1 681 aaKnown RBP12.48□□□□□ -0.41
BRF2-204ENST00000522539 FOXR1Q6PIV2 292 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 PRICKLE2Q7Z3G6 844 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 FSTL5Q8N475 847 aaPredicted RBP12.48□□□□□ -0.41
BRF2-204ENST00000522539 FBXO39Q8N4B4 442 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 ARL10Q8N8L6 244 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 ARHGEF2Q92974 986 aaKnown RBP12.48□□□□□ -0.41
BRF2-204ENST00000522539 ARHGEF26Q96DR7 871 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 SGF29Q96ES7 293 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 TBCBQ99426 244 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 CRACR2AQ9BSW2 395 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 SPON2Q9BUD6 331 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 SLC13A1Q9BZW2 595 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 ZYG11BQ9C0D3 744 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 ZDHHC6Q9H6R6 413 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.48□□□□□ -0.41
BRF2-204ENST00000522539 CTNND2Q9UQB3 1225 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 ACTL7AQ9Y615 435 aa12.48□□□□□ -0.41
BRF2-204ENST00000522539 SCN8AQ9UQD0 1980 aa12.47□□□□□ -0.41
BRF2-204ENST00000522539 COL12A1Q99715 3063 aa12.47□□□□□ -0.41
BRF2-204ENST00000522539 A0A1W2PQM1 296 aa12.47□□□□□ -0.41
BRF2-204ENST00000522539 GTPBP10A4D1E9 387 aaKnown RBP12.47□□□□□ -0.41
BRF2-204ENST00000522539 NVLO15381 856 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms