RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 IQCKQ8N0W5 287 aa6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 KDM1BQ8NB78 822 aa6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 B3GALNT2Q8NCR0 500 aa6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 FDCSPQ8NFU4 85 aa6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 OR5B17Q8NGF7 314 aa6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 DNAJB8Q8NHS0 232 aa6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 RUFY2Q8WXA3 655 aa6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 RELTQ969Z4 430 aa6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 HPDLQ96IR7 371 aa6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 FIZ1Q96SL8 496 aa6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 NAP1L4Q99733 375 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 SPOCK3Q9BQ16 436 aa6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 EFHD1Q9BUP0 239 aa6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 SGPP1Q9BX95 441 aa6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 MTMR12Q9C0I1 747 aa6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 TWSG1Q9GZX9 223 aa6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 DMAP1Q9NPF5 467 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 COMMD8Q9NX08 183 aa6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 ZDHHC3Q9NYG2 299 aa6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 RASAL2Q9UJF2 1139 aa6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 PCDHGC4Q9Y5F7 938 aa6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 STYXL1Q9Y6J8 313 aa6.93□□□□□ -1.3
CTNNA1-216ENST00000519489 ARGFXA6NJG6 315 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 CDK2AP1O14519 115 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 DPM1O60762 260 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 DEXIO95424 95 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 PROCP04070 461 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 HEXAP06865 529 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 CSF2RBP32927 897 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 DLSTP36957 453 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 THOP1P52888 689 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 ST8SIA6P61647 398 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 YBX1P67809 324 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 RBP5P82980 135 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 NUCB1Q02818 461 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 MAP9Q49MG5 647 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 DCAF12Q5T6F0 453 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 NKAIN2Q5VXU1 208 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 ADALQ6DHV7 355 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 HIST2H2BDQ6DRA6 164 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 PLEKHA7Q6IQ23 1121 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 OGFOD3Q6PK18 319 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 KDELC2Q7Z4H8 507 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 NRSN1Q8IZ57 195 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 CHDHQ8NE62 594 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 WFDC11Q8NEX6 87 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 TMA16Q96EY4 203 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 CCDC120Q96HB5 630 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 TBATAQ96M53 351 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 CGRRF1Q99675 332 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 ASPSCR1Q9BZE9 553 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 DCLK3Q9C098 648 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 ZCCHC2Q9C0B9 1178 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 LIME1Q9H400 295 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 KRT82Q9NSB4 513 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 LRIT1Q9P2V4 623 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 IPO11Q9UI26 975 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 STOML2Q9UJZ1 356 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 AGO2Q9UKV8 859 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 ITGA11Q9UKX5 1188 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 KIF3AQ9Y496 699 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 ZNF451Q9Y4E5 1061 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 PCDHGB7Q9Y5F8 929 aa6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 COPG1Q9Y678 874 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-216ENST00000519489 PIPSLA2A3N6 862 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 A6NJY4 79 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 TBL1XO60907 577 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 TACC1O75410 805 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 LRCH4O75427 683 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 KATNA1O75449 491 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 CREG1O75629 220 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 CPNE6O95741 557 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 CCDC130P13994 396 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 GLB1P16278 677 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 NOP2P46087 812 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 RABIFP47224 123 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 MEOX1P50221 254 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 LIMK2P53671 638 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 MAP3K7CLP57077 242 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 CTBSQ01459 385 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 LAMB3Q13751 1172 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 HLTFQ14527 1009 aaKnown RBP eCLIP6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 TRIP4Q15650 581 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 ARSHQ5FYA8 562 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 PITRM1Q5JRX3 1037 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 TTC22Q5TAA0 569 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 RD3Q7Z3Z2 195 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 PIM3Q86V86 326 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 FAM129CQ86XR2 697 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 NT5DC4Q86YG4 428 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 AGBL5Q8NDL9 886 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 BTN2A2Q8WVV5 523 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 JAKMIP2Q96AA8 810 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 ELMO3Q96BJ8 720 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 CENPTQ96BT3 561 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 PRICKLE1Q96MT3 831 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 TREX2Q9BQ50 279 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 SLC17A9Q9BYT1 436 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 AGXT2Q9BYV1 514 aa6.91□□□□□ -1.3
CTNNA1-216ENST00000519489 ING2Q9H160 280 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms