RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 SEPT1Q8WYJ6 367 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 KLHL5Q96PQ7 755 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 TSEN34Q9BSV6 310 aaKnown RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 BEX2Q9BXY8 128 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 TRIM31Q9BZY9 425 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 SCAND2PQ9GZW5 306 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 POLR1BQ9H9Y6 1135 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 TRIM39Q9HCM9 518 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 VCX3AQ9NNX9 186 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 UBA2Q9UBT2 640 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 AGAP1Q9UPQ3 857 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 ZDHHC9Q9Y397 364 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 DOCK1Q14185 1865 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 PPP1R2P9O14990 202 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 MED7O43513 233 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 SLC25A12O75746 678 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 GSNP06396 782 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 GRPP07492 148 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 GSTA2P09210 222 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 TFPIP10646 304 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 FGFR3P22607 806 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 BMI1P35226 326 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 HNF1BP35680 557 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 CDK8P49336 464 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 AP3M2P53677 418 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 STX17P56962 302 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 ITIH3Q06033 890 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 NR5A1Q13285 461 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 CUL3Q13618 768 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 CASP8Q14790 479 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 GPR162Q16538 588 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 INSCQ1MX18 579 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 ATAT1Q5SQI0 421 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 PRAMEF13Q5VWM6 474 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 SLFN12LQ6IEE8 588 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 PAPD4Q6PIY7 484 aaKnown RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 CRTC3Q6UUV7 619 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 STOX1Q6ZVD7 989 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 ZSWIM9Q86XI8 627 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 PALB2Q86YC2 1186 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 RASAL3Q86YV0 1011 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 PQLC1Q8N2U9 271 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 RNF169Q8NCN4 708 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 CNNM3Q8NE01 707 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 LILRB1Q8NHL6 650 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 NCSTNQ92542 709 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 FATE1Q969F0 183 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 NSUN4Q96CB9 384 aaKnown RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 REPS1Q96D71 796 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 FCRL4Q96PJ5 515 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 TSC22D3Q99576 134 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 SH3GL3Q99963 347 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 MLPHQ9BV36 600 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 NUP85Q9BW27 656 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 SMOC1Q9H4F8 434 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 MARK1Q9P0L2 795 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 USP36Q9P275 1121 aaKnown RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 AAR2Q9Y312 384 aaKnown RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 COMMD3-BMI1R4GMX3 469 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 BTBD17A6NE02 478 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 CIDEAO60543 219 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 NKX2-2O95096 273 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 ZIC2O95409 532 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 PAHP00439 452 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 MT-ND5P03915 603 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 NR2F6P10588 404 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 UMPSP11172 480 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 ENO3P13929 434 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 PDIA3P30101 505 aaKnown RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 MC5RP33032 325 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 SERPINB6P35237 376 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 AFF1P51825 1210 aaKnown RBP3.97□□□□□ -1.77
NEDD4-209ENST00000508871 C21orf58P58505 322 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 GRIN1Q05586 938 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 ST3GAL1Q11201 340 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 AAGABQ6PD74 315 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 VTCN1Q7Z7D3 282 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 SPERTQ8NA61 448 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 OR5M3Q8NGP4 307 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 PPP1R13LQ8WUF5 828 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 ASB2Q96Q27 587 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 ABHD1Q96SE0 405 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 NELL2Q99435 816 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 DCUN1D5Q9BTE7 237 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 FNDC11Q9BVV2 318 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 OSBPL10Q9BXB5 764 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 PANK2Q9BZ23 570 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 CNTD2Q9H8S5 307 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 ABCB10Q9NRK6 738 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 TBC1D13Q9NVG8 400 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 STK32BQ9NY57 414 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 SENP1Q9P0U3 644 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 PEMTQ9UBM1 199 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 B4GALT6Q9UBX8 382 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 SUN2Q9UH99 717 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 NCKAP1Q9Y2A7 1128 aa3.97□□□□□ -1.77
NEDD4-209ENST00000508871 TRBV23OR9-2A0A075B6M9 112 aa3.96□□□□□ -1.77
NEDD4-209ENST00000508871 O00370 1275 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms