RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 APC2O95996 2303 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 TDRD6O60522 2096 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 URB1O60287 2271 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-227ENST00000508852 MYLKQ15746 1914 aa13.8□□□□□ -0.2
CCHCR1-227ENST00000508852 SPTY2D1-AS1A0A0U1RR47 76 aa13.8□□□□□ -0.2
CCHCR1-227ENST00000508852 EPHB6O15197 1021 aa13.8□□□□□ -0.2
CCHCR1-227ENST00000508852 RRP8O43159 456 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-227ENST00000508852 CD160O95971 181 aa13.8□□□□□ -0.2
CCHCR1-227ENST00000508852 CSF2P04141 144 aa13.8□□□□□ -0.2
CCHCR1-227ENST00000508852 ELP6Q0PNE2 266 aa13.8□□□□□ -0.2
CCHCR1-227ENST00000508852 TARDBPQ13148 414 aaKnown RBP eCLIP13.8□□□□□ -0.2
CCHCR1-227ENST00000508852 TTC7BQ86TV6 843 aa13.8□□□□□ -0.2
CCHCR1-227ENST00000508852 UMODL1-AS1Q8N2C9 162 aa13.8□□□□□ -0.2
CCHCR1-227ENST00000508852 TPCN2Q8NHX9 752 aa13.8□□□□□ -0.2
CCHCR1-227ENST00000508852 CXorf40AQ8TE69 158 aa13.8□□□□□ -0.2
CCHCR1-227ENST00000508852 GRAMD1AQ96CP6 724 aa13.8□□□□□ -0.2
CCHCR1-227ENST00000508852 BMFQ96LC9 184 aa13.8□□□□□ -0.2
CCHCR1-227ENST00000508852 MYOCQ99972 504 aa13.8□□□□□ -0.2
CCHCR1-227ENST00000508852 DNAJC28Q9NX36 388 aa13.8□□□□□ -0.2
CCHCR1-227ENST00000508852 TMEM110-MUSTN1A8MSY1 372 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 FAM72CH0Y354 149 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 TRIM38O00635 465 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 TPP1O14773 563 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 SDC3O75056 442 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 UGT2B4P06133 528 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 NME1P15531 152 aaKnown RBP13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 TNFAIP3P21580 790 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 XPAP23025 273 aaPredicted RBP13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 ACTN2P35609 894 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 RPIAP49247 311 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 NDST2P52849 883 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 RHOAP61586 193 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 FAM72AQ5TYM5 149 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 FAM72DQ6L9T8 149 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 ZCCHC8Q6NZY4 707 aaKnown RBP13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 PHLDB2Q86SQ0 1253 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 FAM72BQ86X60 149 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 DNAAF5Q86Y56 855 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 PSTKQ8IV42 348 aaKnown RBP13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 MCOLN2Q8IZK6 566 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 LSMEM2Q8N112 164 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 DCBLD1Q8N8Z6 715 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 WDR48Q8TAF3 677 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 KLHL32Q96NJ5 620 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 MCEEQ96PE7 176 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 DEPDC7Q96QD5 511 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 BPIFA3Q9BQP9 254 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 FZD3Q9NPG1 666 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 NDFIP2Q9NV92 336 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 SALL4Q9UJQ4 1053 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 FZD10Q9ULW2 581 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 NEU3Q9UQ49 428 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 CA5BQ9Y2D0 317 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 ZFYVE26Q68DK2 2539 aa13.79□□□□□ -0.2
CCHCR1-227ENST00000508852 LAMA5O15230 3695 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 CACNA1GO43497 2377 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 TCRBV5S1A1TA0A578 114 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 IGLON5A6NGN9 336 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 RASA4BC9J798 803 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 AREL1O15033 823 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 CCP110O43303 1012 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 RASA4O43374 803 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 CREB3O43889 395 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 TM7SF2O76062 418 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 RNF8O76064 485 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 TMCC1O94876 653 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 BLKP51451 505 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 THOP1P52888 689 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 CLDN2P57739 230 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 INSM1Q01101 510 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 SERINC3Q13530 473 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 PDE1CQ14123 709 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 COL28A1Q2UY09 1125 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 PPP1R15BQ5SWA1 713 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 CFAP58Q5T655 872 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 TMC6Q7Z403 805 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 PDZD3Q86UT5 571 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 SLC22A18ASQ8N1D0 253 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 SDR16C5Q8N3Y7 309 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 ATL2Q8NHH9 583 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 TRIM11Q96F44 468 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 ZNF641Q96N77 438 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 ABCG4Q9H172 646 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 SPASTQ9UBP0 616 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 ITPR1Q14643 2758 aa13.78□□□□□ -0.2
CCHCR1-227ENST00000508852 FAM170AA1A519 330 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 POM121BA6NF01 834 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 ARHGAP42A6NI28 874 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 FFAR2O15552 330 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 AQP9O43315 295 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 MT-CO3P00414 261 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 GZMAP12544 262 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 ABCG1P45844 678 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 PEX5P50542 639 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 TPI1P60174 286 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 PFN3P60673 137 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 FGL2Q14314 439 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 FZD2Q14332 565 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 RFTN1Q14699 578 aaPredicted RBP13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 TMCO4Q5TGY1 634 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms