RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 FGFR1OP2Q9NVK5 253 aa22.25■■□□□ 1.15
PTPN13-205ENST00000502971 MTCL1Q9Y4B5 1905 aaKnown RBP22.25■■□□□ 1.15
PTPN13-205ENST00000502971 TTC24A2A3L6 582 aaPredicted RBP22.24■■□□□ 1.15
PTPN13-205ENST00000502971 CBX4O00257 560 aa22.24■■□□□ 1.15
PTPN13-205ENST00000502971 PAPSS2O95340 614 aaPredicted RBP22.24■■□□□ 1.15
PTPN13-205ENST00000502971 ATXN1LP0C7T5 689 aaKnown RBP22.24■■□□□ 1.15
PTPN13-205ENST00000502971 PTPN2P17706 415 aa22.24■■□□□ 1.15
PTPN13-205ENST00000502971 GLDCP23378 1020 aa22.24■■□□□ 1.15
PTPN13-205ENST00000502971 HOXA9P31269 272 aa22.24■■□□□ 1.15
PTPN13-205ENST00000502971 CDK18Q07002 472 aa22.24■■□□□ 1.15
PTPN13-205ENST00000502971 SIRPB2Q5JXA9 342 aa22.24■■□□□ 1.15
PTPN13-205ENST00000502971 ESRP1Q6NXG1 681 aaKnown RBP22.24■■□□□ 1.15
PTPN13-205ENST00000502971 CCDC197Q8NCU1 140 aa22.24■■□□□ 1.15
PTPN13-205ENST00000502971 ISL2Q96A47 359 aa22.24■■□□□ 1.15
PTPN13-205ENST00000502971 GRAMD1AQ96CP6 724 aa22.24■■□□□ 1.15
PTPN13-205ENST00000502971 FAM111AQ96PZ2 611 aa22.24■■□□□ 1.15
PTPN13-205ENST00000502971 ELAC2Q9BQ52 826 aaKnown RBP22.24■■□□□ 1.15
PTPN13-205ENST00000502971 SLC46A2Q9BY10 475 aa22.24■■□□□ 1.15
PTPN13-205ENST00000502971 PCMTD2Q9NV79 361 aa22.24■■□□□ 1.15
PTPN13-205ENST00000502971 ARHGAP26Q9UNA1 814 aa22.24■■□□□ 1.15
PTPN13-205ENST00000502971 TPP1O14773 563 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 TIMM44O43615 452 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 CSPG5O95196 566 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 ALDOAP04075 364 aaKnown RBP22.23■■□□□ 1.15
PTPN13-205ENST00000502971 FGF1P05230 155 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 GJA1P17302 382 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 ARCN1P48444 511 aaKnown RBP22.23■■□□□ 1.15
PTPN13-205ENST00000502971 LAMB3Q13751 1172 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 SEPT6Q14141 434 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 CYTH1Q15438 398 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 MPP7Q5T2T1 576 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 STXBP5Q5T5C0 1151 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 CDHR3Q6ZTQ4 885 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 NLRP9Q7RTR0 991 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 MCMBPQ9BTE3 642 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 SLC13A1Q9BZW2 595 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 MAN1C1Q9NR34 630 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 LAMA2P24043 3122 aaKnown RBP22.23■■□□□ 1.15
PTPN13-205ENST00000502971 MIA3Q5JRA6 1907 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 SOBPA7XYQ1 873 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 LEFTY2O00292 366 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 SIN3BO75182 1162 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 HADHAP40939 763 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 ARF5P84085 180 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 CDH18Q13634 790 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 SMAD1Q15797 465 aaKnown RBP22.23■■□□□ 1.15
PTPN13-205ENST00000502971 UGP2Q16851 508 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 MPPE1Q53F39 396 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 FAM109BQ6ICB4 259 aaPredicted RBP22.23■■□□□ 1.15
PTPN13-205ENST00000502971 ANKS4BQ8N8V4 417 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 TDRD5Q8NAT2 981 aaKnown RBP22.23■■□□□ 1.15
PTPN13-205ENST00000502971 LEMD2Q8NC56 503 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 ZNF75CPQ92670 426 aaPredicted RBP22.23■■□□□ 1.15
PTPN13-205ENST00000502971 ATP2A3Q93084 1043 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 FEM1AQ9BSK4 669 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 OR51B4Q9Y5P0 310 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 ACTL7AQ9Y615 435 aa22.23■■□□□ 1.15
PTPN13-205ENST00000502971 CCDC78A2IDD5 438 aa22.22■■□□□ 1.15
PTPN13-205ENST00000502971 GRXCR1A8MXD5 290 aa22.22■■□□□ 1.15
PTPN13-205ENST00000502971 SCAMP3O14828 347 aaKnown RBP22.22■■□□□ 1.15
PTPN13-205ENST00000502971 GRM6O15303 877 aa22.22■■□□□ 1.15
PTPN13-205ENST00000502971 SNX3O60493 162 aa22.22■■□□□ 1.15
PTPN13-205ENST00000502971 ZMPSTE24O75844 475 aa22.22■■□□□ 1.15
PTPN13-205ENST00000502971 VAPBO95292 243 aa22.22■■□□□ 1.15
PTPN13-205ENST00000502971 CA3P07451 260 aa22.22■■□□□ 1.15
PTPN13-205ENST00000502971 HNRNPA1P09651 372 aaKnown RBP eCLIP22.22■■□□□ 1.15
PTPN13-205ENST00000502971 CR2P20023 1033 aa22.22■■□□□ 1.15
PTPN13-205ENST00000502971 SERPINB8P50452 374 aa22.22■■□□□ 1.15
PTPN13-205ENST00000502971 ITIH4Q14624 930 aa22.22■■□□□ 1.15
PTPN13-205ENST00000502971 RAB30Q15771 203 aa22.22■■□□□ 1.15
PTPN13-205ENST00000502971 FSCBQ5H9T9 825 aa22.22■■□□□ 1.15
PTPN13-205ENST00000502971 TSTD2Q5T7W7 516 aa22.22■■□□□ 1.15
PTPN13-205ENST00000502971 PDE12Q6L8Q7 609 aaKnown RBP22.22■■□□□ 1.15
PTPN13-205ENST00000502971 BBS7Q8IWZ6 715 aa22.22■■□□□ 1.15
PTPN13-205ENST00000502971 SHKBP1Q8TBC3 707 aa22.22■■□□□ 1.15
PTPN13-205ENST00000502971 CABS1Q96KC9 395 aa22.22■■□□□ 1.15
PTPN13-205ENST00000502971 PITPNM3Q9BZ71 974 aa22.22■■□□□ 1.15
PTPN13-205ENST00000502971 C12orf65Q9H3J6 166 aaKnown RBP22.22■■□□□ 1.15
PTPN13-205ENST00000502971 HCFC1R1Q9NWW0 138 aa22.22■■□□□ 1.15
PTPN13-205ENST00000502971 DCDC2Q9UHG0 476 aa22.22■■□□□ 1.15
PTPN13-205ENST00000502971 NRG2O14511 850 aaPredicted RBP22.21■■□□□ 1.15
PTPN13-205ENST00000502971 INSIG1O15503 277 aa22.21■■□□□ 1.15
PTPN13-205ENST00000502971 CLASP2O75122 1294 aaKnown RBP22.21■■□□□ 1.15
PTPN13-205ENST00000502971 GLRA3O75311 464 aa22.21■■□□□ 1.15
PTPN13-205ENST00000502971 IRS1P35568 1242 aa22.21■■□□□ 1.15
PTPN13-205ENST00000502971 CCR2P41597 374 aa22.21■■□□□ 1.15
PTPN13-205ENST00000502971 MAGEA12P43365 314 aa22.21■■□□□ 1.15
PTPN13-205ENST00000502971 NUMBP49757 651 aa22.21■■□□□ 1.15
PTPN13-205ENST00000502971 THOC5Q13769 683 aaKnown RBP22.21■■□□□ 1.15
PTPN13-205ENST00000502971 CAMK1Q14012 370 aa22.21■■□□□ 1.15
PTPN13-205ENST00000502971 CNGA3Q16281 694 aa22.21■■□□□ 1.15
PTPN13-205ENST00000502971 ARHGAP15Q53QZ3 475 aa22.21■■□□□ 1.15
PTPN13-205ENST00000502971 INO80DQ53TQ3 878 aaPredicted RBP22.21■■□□□ 1.15
PTPN13-205ENST00000502971 GPR158Q5T848 1215 aa22.21■■□□□ 1.15
PTPN13-205ENST00000502971 FSTL4Q6MZW2 842 aa22.21■■□□□ 1.15
PTPN13-205ENST00000502971 C6orf89Q6UWU4 347 aa22.21■■□□□ 1.15
PTPN13-205ENST00000502971 DCLK2Q8N568 766 aa22.21■■□□□ 1.15
PTPN13-205ENST00000502971 GABPB2Q8TAK5 448 aaPredicted RBP22.21■■□□□ 1.15
PTPN13-205ENST00000502971 DDI1Q8WTU0 396 aa22.21■■□□□ 1.15
PTPN13-205ENST00000502971 NUDCD1Q96RS6 583 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms