RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 ATP6V1DQ9Y5K8 247 aa14.17□□□□□ -0.14
CCDC58-207ENST00000498466 ILVBLA1L0T0 632 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 C16orf96A6NNT2 1141 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 TMX2-CTNND1H3BSU7 103 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 I6L893 689 aaPredicted RBP14.16□□□□□ -0.14
CCDC58-207ENST00000498466 SUV39H1O43463 412 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 SRGAP2O75044 1071 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 ERBB2P04626 1255 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 JMJD7P0C870 316 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 LIPCP11150 499 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 SFTPCP11686 197 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 CD44P16070 742 aaKnown RBP14.16□□□□□ -0.14
CCDC58-207ENST00000498466 TFE3P19532 575 aaPredicted RBP14.16□□□□□ -0.14
CCDC58-207ENST00000498466 GKP32189 559 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 CXCR3P49682 368 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 SULT1E1P49888 294 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 SNX16P57768 344 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 RNASE9P60153 205 aaKnown RBP14.16□□□□□ -0.14
CCDC58-207ENST00000498466 ARF5P84085 180 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 PPARDQ03181 441 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 DEUP1Q05D60 604 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 ARHGAP44Q17R89 818 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 GJB7Q6PEY0 223 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 ZNF783Q6ZMS7 281 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 SLC26A9Q7LBE3 791 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 VPS36Q86VN1 386 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 TRIM59Q8IWR1 403 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 SDR16C5Q8N3Y7 309 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 ARL10Q8N8L6 244 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 OR6K2Q8NGY2 324 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 SCG3Q8WXD2 468 aaKnown RBP14.16□□□□□ -0.14
CCDC58-207ENST00000498466 CCDC74AQ96AQ1 378 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 CENPTQ96BT3 561 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 NPY6RQ99463 290 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.16□□□□□ -0.14
CCDC58-207ENST00000498466 SEPT10Q9P0V9 454 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 PISDQ9UG56 409 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 RABGEF1Q9UJ41 708 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 STAP1Q9ULZ2 295 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 PAXBP1Q9Y5B6 917 aa14.16□□□□□ -0.14
CCDC58-207ENST00000498466 TRPM6Q9BX84 2022 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 IGLV3-10A0A075B6K4 115 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 BECN2A8MW95 431 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 D6RAR5 112 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 ZMPSTE24O75844 475 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 GNA14O95837 355 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 RPLP0P05388 317 aaKnown RBP14.15□□□□□ -0.14
CCDC58-207ENST00000498466 CELA2BP08218 269 aaPredicted RBP14.15□□□□□ -0.14
CCDC58-207ENST00000498466 ITGB6P18564 788 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 IGFALSP35858 605 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 EIF4A3P38919 411 aaKnown RBP14.15□□□□□ -0.14
CCDC58-207ENST00000498466 PPP1R2P41236 205 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 YPEL5P62699 121 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 CCL7P80098 99 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 ELOCQ15369 112 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 TCEA2Q15560 299 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 ZNF805Q5CZA5 627 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 MANEAQ5SRI9 462 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 TTI2Q6NXR4 508 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 MACC1Q6ZN28 852 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 ZNF574Q6ZN55 896 aaPredicted RBP14.15□□□□□ -0.14
CCDC58-207ENST00000498466 ZSCAN1Q8NBB4 408 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 KYQ8NBH2 561 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 ZNF397Q8NF99 534 aaPredicted RBP14.15□□□□□ -0.14
CCDC58-207ENST00000498466 NELFBQ8WX92 580 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 ARHGEF26Q96DR7 871 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 C1orf74Q96LT6 269 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 CPEB1Q9BZB8 566 aaKnown RBP14.15□□□□□ -0.14
CCDC58-207ENST00000498466 TMPRSS4Q9NRS4 437 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 HOOK1Q9UJC3 728 aaKnown RBP14.15□□□□□ -0.14
CCDC58-207ENST00000498466 ACSL6Q9UKU0 697 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 PCDHGC3Q9UN70 934 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 ACTL7AQ9Y615 435 aa14.15□□□□□ -0.14
CCDC58-207ENST00000498466 BICDL2A1A5D9 508 aa14.14□□□□□ -0.15
CCDC58-207ENST00000498466 AGRPO00253 132 aa14.14□□□□□ -0.15
CCDC58-207ENST00000498466 KRIT1O00522 736 aa14.14□□□□□ -0.15
CCDC58-207ENST00000498466 F9P00740 461 aa14.14□□□□□ -0.15
CCDC58-207ENST00000498466 CTSEP14091 401 aa14.14□□□□□ -0.15
CCDC58-207ENST00000498466 BLKP51451 505 aa14.14□□□□□ -0.15
CCDC58-207ENST00000498466 GNA12Q03113 381 aa14.14□□□□□ -0.15
CCDC58-207ENST00000498466 PTPN20Q4JDL3 420 aa14.14□□□□□ -0.15
CCDC58-207ENST00000498466 ACBD5Q5T8D3 534 aaPredicted RBP14.14□□□□□ -0.15
CCDC58-207ENST00000498466 VASH2Q86V25 355 aa14.14□□□□□ -0.15
CCDC58-207ENST00000498466 DRC7Q8IY82 874 aa14.14□□□□□ -0.15
CCDC58-207ENST00000498466 FSTL5Q8N475 847 aaPredicted RBP14.14□□□□□ -0.15
CCDC58-207ENST00000498466 PCDH19Q8TAB3 1148 aa14.14□□□□□ -0.15
CCDC58-207ENST00000498466 FAM81BQ96LP2 452 aa14.14□□□□□ -0.15
CCDC58-207ENST00000498466 TMEM74Q96NL1 305 aa14.14□□□□□ -0.15
CCDC58-207ENST00000498466 TBCBQ99426 244 aa14.14□□□□□ -0.15
CCDC58-207ENST00000498466 CRACR2AQ9BSW2 395 aa14.14□□□□□ -0.15
CCDC58-207ENST00000498466 C1QTNF7Q9BXJ2 289 aa14.14□□□□□ -0.15
CCDC58-207ENST00000498466 ZYG11BQ9C0D3 744 aa14.14□□□□□ -0.15
CCDC58-207ENST00000498466 CTNND2Q9UQB3 1225 aa14.14□□□□□ -0.15
CCDC58-207ENST00000498466 LOXL2Q9Y4K0 774 aa14.14□□□□□ -0.15
CCDC58-207ENST00000498466 PCDHGA4Q9Y5G9 962 aa14.14□□□□□ -0.15
CCDC58-207ENST00000498466 A0A1W2PQM1 296 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 GOLGA6L4A6NEF3 574 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 NVLO15381 856 aaKnown RBP14.13□□□□□ -0.15
CCDC58-207ENST00000498466 MMP20O60882 483 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 PPFIA2O75334 1257 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms