RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 MDC1Q14676 2089 aaKnown RBP14.77□□□□□ -0.04
CHMP2B-205ENST00000494980 A6NCN8 305 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 B4DGG1 531 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 TULP2O00295 520 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 NUDT21O43809 227 aaKnown RBP14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 ZG16O60844 167 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 PPP6R2O75170 966 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 STK17BO94768 372 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 MOCS2O96007 188 aaPredicted RBP14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 SNRPB2P08579 225 aaKnown RBP14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 CD58P19256 250 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 MPSTP25325 297 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 ITGA3P26006 1051 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 HOXD13P35453 343 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 CLCN1P35523 988 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 PLK1P53350 603 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 LIMK2P53671 638 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 PER3P56645 1201 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 YPEL5P62699 121 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 TRA2AQ13595 282 aaKnown RBP eCLIP14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 SGSM1Q2NKQ1 1148 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 ARSIQ5FYB1 569 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 NYAP1Q6ZVC0 841 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 CDH24Q86UP0 819 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 FCRL2Q96LA5 508 aaPredicted RBP14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 CCDC114Q96M63 670 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 TRIT1Q9H3H1 467 aaKnown RBP14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 AGPAT3Q9NRZ7 376 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 RPS6KL1Q9Y6S9 549 aa14.77□□□□□ -0.05
CHMP2B-205ENST00000494980 CLIC2O15247 247 aa14.76□□□□□ -0.05
CHMP2B-205ENST00000494980 INPP4BO15327 924 aa14.76□□□□□ -0.05
CHMP2B-205ENST00000494980 LRCH4O75427 683 aa14.76□□□□□ -0.05
CHMP2B-205ENST00000494980 RASGRP1O95267 797 aa14.76□□□□□ -0.05
CHMP2B-205ENST00000494980 GJB2P29033 226 aa14.76□□□□□ -0.05
CHMP2B-205ENST00000494980 ALDH4A1P30038 563 aa14.76□□□□□ -0.05
CHMP2B-205ENST00000494980 DLSTP36957 453 aa14.76□□□□□ -0.05
CHMP2B-205ENST00000494980 HDAC4P56524 1084 aa14.76□□□□□ -0.05
CHMP2B-205ENST00000494980 CENPCQ03188 943 aa14.76□□□□□ -0.05
CHMP2B-205ENST00000494980 SEMA5AQ13591 1074 aa14.76□□□□□ -0.05
CHMP2B-205ENST00000494980 SMTNL2Q2TAL5 461 aa14.76□□□□□ -0.05
CHMP2B-205ENST00000494980 RILPL1Q5EBL4 403 aa14.76□□□□□ -0.05
CHMP2B-205ENST00000494980 SLC6A19Q695T7 634 aa14.76□□□□□ -0.05
CHMP2B-205ENST00000494980 ZSCAN30Q86W11 494 aa14.76□□□□□ -0.05
CHMP2B-205ENST00000494980 BMPERQ8N8U9 685 aa14.76□□□□□ -0.05
CHMP2B-205ENST00000494980 XXYLT1Q8NBI6 393 aa14.76□□□□□ -0.05
CHMP2B-205ENST00000494980 FAM46DQ8NEK8 389 aa14.76□□□□□ -0.05
CHMP2B-205ENST00000494980 CENPTQ96BT3 561 aa14.76□□□□□ -0.05
CHMP2B-205ENST00000494980 ASF1BQ9NVP2 202 aa14.76□□□□□ -0.05
CHMP2B-205ENST00000494980 XPO7Q9UIA9 1087 aaKnown RBP14.76□□□□□ -0.05
CHMP2B-205ENST00000494980 TMEM184BQ9Y519 407 aaPredicted RBP14.76□□□□□ -0.05
CHMP2B-205ENST00000494980 MYO7BQ6PIF6 2116 aa14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 ANKRD36A6QL64 1941 aa14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 FRMD3A2A2Y4 597 aa14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 LRRIQ3A6PVS8 624 aaPredicted RBP14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 EIF3DO15371 548 aaKnown RBP eCLIP14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 LRRTM2O43300 516 aa14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 AP1G1O43747 822 aa14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 LEFTY1O75610 366 aa14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 ASS1P00966 412 aaKnown RBP14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 THRAP10827 490 aa14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 SRCP12931 536 aa14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 SRSF11Q05519 484 aaKnown RBP14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 CLPPQ16740 277 aaPredicted RBP14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 ZNF394Q53GI3 561 aa14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 CPZQ66K79 652 aa14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 RAP1GAP2Q684P5 730 aa14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 CXorf57Q6NSI4 855 aaKnown RBP14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 OGFOD3Q6PK18 319 aa14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 CHSY1Q86X52 802 aa14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 CCAR2Q8N163 923 aaKnown RBP14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 ASB12Q8WXK4 309 aa14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 TATDN2Q93075 761 aa14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 SNRNP40Q96DI7 357 aaKnown RBP14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 TWSG1Q9GZX9 223 aa14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 LRRC4Q9HBW1 653 aa14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 PANK4Q9NVE7 773 aa14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 IL36AQ9UHA7 158 aa14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 CROTQ9UKG9 612 aa14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 ITM2BQ9Y287 266 aa14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 PCDHGA9Q9Y5G4 932 aaKnown RBP14.75□□□□□ -0.05
CHMP2B-205ENST00000494980 DLGAP3O95886 979 aa14.74□□□□□ -0.05
CHMP2B-205ENST00000494980 MT-CO1P00395 513 aa14.74□□□□□ -0.05
CHMP2B-205ENST00000494980 SLC8A3P57103 927 aa14.74□□□□□ -0.05
CHMP2B-205ENST00000494980 CDK18Q07002 472 aa14.74□□□□□ -0.05
CHMP2B-205ENST00000494980 STXBP4Q6ZWJ1 553 aa14.74□□□□□ -0.05
CHMP2B-205ENST00000494980 PARS2Q7L3T8 475 aaKnown RBP14.74□□□□□ -0.05
CHMP2B-205ENST00000494980 SIX6OS1Q8N1H7 587 aa14.74□□□□□ -0.05
CHMP2B-205ENST00000494980 ESX1Q8N693 406 aa14.74□□□□□ -0.05
CHMP2B-205ENST00000494980 FAM184AQ8NB25 1140 aa14.74□□□□□ -0.05
CHMP2B-205ENST00000494980 OR4D9Q8NGE8 314 aa14.74□□□□□ -0.05
CHMP2B-205ENST00000494980 ALG14Q96F25 216 aa14.74□□□□□ -0.05
CHMP2B-205ENST00000494980 TRIM8Q9BZR9 551 aa14.74□□□□□ -0.05
CHMP2B-205ENST00000494980 MLXIPLQ9NP71 852 aa14.74□□□□□ -0.05
CHMP2B-205ENST00000494980 VPS28Q9UK41 221 aa14.74□□□□□ -0.05
CHMP2B-205ENST00000494980 K7ERQ8 282 aa14.73□□□□□ -0.05
CHMP2B-205ENST00000494980 NEMP1O14524 444 aa14.73□□□□□ -0.05
CHMP2B-205ENST00000494980 TGFB1I1O43294 461 aa14.73□□□□□ -0.05
CHMP2B-205ENST00000494980 KATNA1O75449 491 aa14.73□□□□□ -0.05
CHMP2B-205ENST00000494980 CD1EP15812 388 aa14.73□□□□□ -0.05
CHMP2B-205ENST00000494980 TACR2P21452 398 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms