RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 AARSP49588 968 aaKnown RBP eCLIP3.95□□□□□ -1.78
HMGN1-218ENST00000490032 CHAF1AQ13111 956 aaPredicted RBP3.95□□□□□ -1.78
HMGN1-218ENST00000490032 KRTAP24-1Q3LI83 254 aa3.95□□□□□ -1.78
HMGN1-218ENST00000490032 TUBB8Q3ZCM7 444 aa3.95□□□□□ -1.78
HMGN1-218ENST00000490032 PLEKHO1Q53GL0 409 aaPredicted RBP3.95□□□□□ -1.78
HMGN1-218ENST00000490032 DENND1BQ6P3S1 775 aa3.95□□□□□ -1.78
HMGN1-218ENST00000490032 DENND6AQ8IWF6 608 aa3.95□□□□□ -1.78
HMGN1-218ENST00000490032 AADATQ8N5Z0 425 aa3.95□□□□□ -1.78
HMGN1-218ENST00000490032 SAMD3Q8N6K7 520 aa3.95□□□□□ -1.78
HMGN1-218ENST00000490032 ZBTB8BQ8NAP8 495 aaPredicted RBP3.95□□□□□ -1.78
HMGN1-218ENST00000490032 TMEM170AQ8WVE7 144 aa3.95□□□□□ -1.78
HMGN1-218ENST00000490032 TRAPPC12Q8WVT3 735 aa3.95□□□□□ -1.78
HMGN1-218ENST00000490032 RNFT2Q96EX2 444 aa3.95□□□□□ -1.78
HMGN1-218ENST00000490032 HES6Q96HZ4 224 aa3.95□□□□□ -1.78
HMGN1-218ENST00000490032 DERAQ9Y315 318 aa3.95□□□□□ -1.78
HMGN1-218ENST00000490032 KIF26BQ2KJY2 2108 aa3.94□□□□□ -1.78
HMGN1-218ENST00000490032 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.94□□□□□ -1.78
HMGN1-218ENST00000490032 DHX16O60231 1041 aaKnown RBP3.94□□□□□ -1.78
HMGN1-218ENST00000490032 PLGP00747 810 aaPredicted RBP3.94□□□□□ -1.78
HMGN1-218ENST00000490032 ADAP00813 363 aa3.94□□□□□ -1.78
HMGN1-218ENST00000490032 F7P08709 466 aaPredicted RBP3.94□□□□□ -1.78
HMGN1-218ENST00000490032 TTKP33981 857 aa3.94□□□□□ -1.78
HMGN1-218ENST00000490032 RPL3P39023 403 aaKnown RBP3.94□□□□□ -1.78
HMGN1-218ENST00000490032 ARSFP54793 590 aa3.94□□□□□ -1.78
HMGN1-218ENST00000490032 CYP4A11Q02928 519 aa3.94□□□□□ -1.78
HMGN1-218ENST00000490032 DLG1Q12959 904 aa3.94□□□□□ -1.78
HMGN1-218ENST00000490032 MYBPHQ13203 477 aa3.94□□□□□ -1.78
HMGN1-218ENST00000490032 SNTA1Q13424 505 aa3.94□□□□□ -1.78
HMGN1-218ENST00000490032 BRD3Q15059 726 aa3.94□□□□□ -1.78
HMGN1-218ENST00000490032 SF3B4Q15427 424 aaKnown RBP eCLIP3.94□□□□□ -1.782e-14■■□□□ 12.5
HMGN1-218ENST00000490032 TYW3Q6IPR3 259 aaKnown RBP3.94□□□□□ -1.78
HMGN1-218ENST00000490032 NAPEPLDQ6IQ20 393 aa3.94□□□□□ -1.78
HMGN1-218ENST00000490032 CCDC129Q6ZRS4 1044 aa3.94□□□□□ -1.78
HMGN1-218ENST00000490032 NEK10Q6ZWH5 1172 aa3.94□□□□□ -1.78
HMGN1-218ENST00000490032 MUC20Q8N307 709 aaPredicted RBP3.94□□□□□ -1.78
HMGN1-218ENST00000490032 RASSF8Q8NHQ8 419 aa3.94□□□□□ -1.78
HMGN1-218ENST00000490032 TRIB2Q92519 343 aa3.94□□□□□ -1.78
HMGN1-218ENST00000490032 RUBCNQ92622 972 aa3.94□□□□□ -1.78
HMGN1-218ENST00000490032 RNF183Q96D59 192 aa3.94□□□□□ -1.78
HMGN1-218ENST00000490032 KIF17Q9P2E2 1029 aa3.94□□□□□ -1.78
HMGN1-218ENST00000490032 MAGEA13PA6NCF6 341 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 PRSS47A8MTI9 375 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 NPIPB11E5RHQ5 1161 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 J3KR12 359 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 LINC01565O15544 149 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 GRID2O43424 1007 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 BUB3O43684 328 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 VNN2O95498 520 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 CH25HO95992 272 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 IGHV4-30-4P0DP06 118 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 ACTR2P61160 394 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 GOLGA8FQ08AF8 430 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 TRIM14Q14142 442 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 FBXO43Q4G163 708 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 CTXN3Q4LDR2 81 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 SETMARQ53H47 684 aaPredicted RBP3.93□□□□□ -1.78
HMGN1-218ENST00000490032 XKR9Q5GH70 373 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 FAM69BQ5VUD6 431 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 RETSATQ6NUM9 610 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 CCDC174Q6PII3 467 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 KLHL24Q6TFL4 600 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 MON1AQ86VX9 555 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 MB21D2Q8IYB1 491 aaPredicted RBP3.93□□□□□ -1.78
HMGN1-218ENST00000490032 GHDCQ8N2G8 530 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 VPS37AQ8NEZ2 397 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 RFWD2Q8NHY2 731 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 BICD1Q96G01 975 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 RBM17Q96I25 401 aaKnown RBP3.93□□□□□ -1.78
HMGN1-218ENST00000490032 TTC12Q9H892 705 aaPredicted RBP3.93□□□□□ -1.78
HMGN1-218ENST00000490032 ENTPD7Q9NQZ7 604 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 RASSF1Q9NS23 344 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 SPATS2LQ9NUQ6 558 aaKnown RBP3.93□□□□□ -1.78
HMGN1-218ENST00000490032 ANKRD10Q9NXR5 420 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 CNPY2Q9Y2B0 182 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 NFS1Q9Y697 457 aa3.93□□□□□ -1.78
HMGN1-218ENST00000490032 A0A0B4J293 547 aa3.92□□□□□ -1.78
HMGN1-218ENST00000490032 CCDC194A0A1B0GVG4 234 aa3.92□□□□□ -1.78
HMGN1-218ENST00000490032 STX16-NPEPL1H3BU86 382 aa3.92□□□□□ -1.78
HMGN1-218ENST00000490032 BMPR1BO00238 502 aa3.92□□□□□ -1.78
HMGN1-218ENST00000490032 EBAG9O00559 213 aa3.92□□□□□ -1.78
HMGN1-218ENST00000490032 STX16O14662 325 aa3.92□□□□□ -1.78
HMGN1-218ENST00000490032 UMODP07911 640 aa3.92□□□□□ -1.78
HMGN1-218ENST00000490032 PEX5P50542 639 aa3.92□□□□□ -1.78
HMGN1-218ENST00000490032 CAPSQ13938 189 aa3.92□□□□□ -1.78
HMGN1-218ENST00000490032 POSTNQ15063 836 aa3.92□□□□□ -1.78
HMGN1-218ENST00000490032 SLC18A3Q16572 532 aa3.92□□□□□ -1.78
HMGN1-218ENST00000490032 PGBD5Q8N414 524 aa3.92□□□□□ -1.78
HMGN1-218ENST00000490032 SPPL3Q8TCT6 385 aa3.92□□□□□ -1.78
HMGN1-218ENST00000490032 SH3KBP1Q96B97 665 aa3.92□□□□□ -1.78
HMGN1-218ENST00000490032 SCMH1Q96GD3 660 aa3.92□□□□□ -1.78
HMGN1-218ENST00000490032 LRFN5Q96NI6 719 aa3.92□□□□□ -1.78
HMGN1-218ENST00000490032 IL17FQ96PD4 163 aa3.92□□□□□ -1.78
HMGN1-218ENST00000490032 INPP4AQ96PE3 977 aaPredicted RBP3.92□□□□□ -1.78
HMGN1-218ENST00000490032 YME1L1Q96TA2 773 aa3.92□□□□□ -1.78
HMGN1-218ENST00000490032 OR6C3Q9NZP0 311 aa3.92□□□□□ -1.78
HMGN1-218ENST00000490032 IFT80Q9P2H3 777 aaPredicted RBP3.92□□□□□ -1.78
HMGN1-218ENST00000490032 SAA2-SAA4A0A096LPE2 208 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 CPED1A4D0V7 1026 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 WNT9BO14905 357 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 GAGE7O76087 117 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms