RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 CUEDC1Q9NWM3 386 aaPredicted RBP9.36□□□□□ -0.91
SSBP1-212ENST00000489378 TLR6Q9Y2C9 796 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 FADS3Q9Y5Q0 445 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 HIVEP1P15822 2718 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 APCP25054 2843 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 IGLON5A6NGN9 336 aa9.35□□□□□ -0.91
SSBP1-212ENST00000489378 K7ERQ8 282 aa9.35□□□□□ -0.91
SSBP1-212ENST00000489378 CNTN5O94779 1100 aa9.35□□□□□ -0.91
SSBP1-212ENST00000489378 LTFP02788 710 aa9.35□□□□□ -0.91
SSBP1-212ENST00000489378 FYNP06241 537 aa9.35□□□□□ -0.91
SSBP1-212ENST00000489378 TRIM49P0CI25 452 aa9.35□□□□□ -0.91
SSBP1-212ENST00000489378 TRIM49CP0CI26 452 aa9.35□□□□□ -0.91
SSBP1-212ENST00000489378 SRCP12931 536 aa9.35□□□□□ -0.91
SSBP1-212ENST00000489378 OAS2P29728 719 aaKnown RBP9.35□□□□□ -0.91
SSBP1-212ENST00000489378 UGT1A3P35503 534 aa9.35□□□□□ -0.91
SSBP1-212ENST00000489378 THOP1P52888 689 aa9.35□□□□□ -0.91
SSBP1-212ENST00000489378 CEBPZQ03701 1054 aaKnown RBP9.35□□□□□ -0.91
SSBP1-212ENST00000489378 DEFB109BQ30KR1 87 aa9.35□□□□□ -0.91
SSBP1-212ENST00000489378 HEATR4Q86WZ0 1026 aa9.35□□□□□ -0.91
SSBP1-212ENST00000489378 CACNA2D3Q8IZS8 1091 aa9.35□□□□□ -0.91
SSBP1-212ENST00000489378 TEX19Q8NA77 164 aa9.35□□□□□ -0.91
SSBP1-212ENST00000489378 APOBEC4Q8WW27 367 aaKnown RBP9.35□□□□□ -0.91
SSBP1-212ENST00000489378 KCTD13Q8WZ19 329 aa9.35□□□□□ -0.91
SSBP1-212ENST00000489378 FEM1CQ96JP0 617 aa9.35□□□□□ -0.91
SSBP1-212ENST00000489378 LENG8Q96PV6 779 aaPredicted RBP9.35□□□□□ -0.91
SSBP1-212ENST00000489378 FEM1AQ9BSK4 669 aa9.35□□□□□ -0.91
SSBP1-212ENST00000489378 SRRTQ9BXP5 876 aaKnown RBP9.35□□□□□ -0.91
SSBP1-212ENST00000489378 CDH19Q9H159 772 aa9.35□□□□□ -0.91
SSBP1-212ENST00000489378 GPR34Q9UPC5 381 aa9.35□□□□□ -0.91
SSBP1-212ENST00000489378 DOLKQ9UPQ8 538 aa9.35□□□□□ -0.91
SSBP1-212ENST00000489378 OR51B4Q9Y5P0 310 aa9.35□□□□□ -0.91
SSBP1-212ENST00000489378 NAV3Q8IVL0 2385 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 PRNPP04156 253 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 ADRB3P13945 408 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 IRAK1P51617 712 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 NEK3P51956 506 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 NUCB2P80303 420 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 PPARDQ03181 441 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 CDC20Q12834 499 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 SGCGQ13326 291 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 ZC3H12AQ5D1E8 599 aaKnown RBP9.34□□□□□ -0.91
SSBP1-212ENST00000489378 EFHC2Q5JST6 749 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 ATP1A1-AS1Q5TC04 95 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 CEP135Q66GS9 1140 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 CNNM4Q6P4Q7 775 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 UNC13DQ70J99 1090 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 SPRED1Q7Z699 444 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 TAC4Q86UU9 113 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 SLC9A9Q8IVB4 645 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 FAM114A1Q8IWE2 563 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 SFTPA2Q8IWL1 248 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 GOLGA5Q8TBA6 731 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 GPBAR1Q8TDU6 330 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 IRGQQ8WZA9 623 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 SEMA4DQ92854 862 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 RNF34Q969K3 372 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 SLC45A3Q96JT2 553 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 SERPINB11Q96P15 392 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 OCSTAMPQ9BR26 566 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 LRRC27Q9C0I9 530 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 MMRN2Q9H8L6 949 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 CASS4Q9NQ75 786 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 PRDM8Q9NQV8 689 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 HS3ST2Q9Y278 367 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 PDZD2O15018 2839 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 AKAP9Q99996 3911 aa9.34□□□□□ -0.91
SSBP1-212ENST00000489378 PCNX1Q96RV3 2341 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 TCAF2A6NFQ2 919 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 EFCAB7A8K855 629 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 F5H5T6 163 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 SMAD6O43541 496 aaKnown RBP9.33□□□□□ -0.92
SSBP1-212ENST00000489378 SNAP91O60641 907 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 LEFTY1O75610 366 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 DDAH2O95865 285 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 NR3C1P04150 777 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 FGF3P11487 239 aaPredicted RBP9.33□□□□□ -0.92
SSBP1-212ENST00000489378 RRM1P23921 792 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 IGFALSP35858 605 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 RECQLP46063 649 aaPredicted RBP9.33□□□□□ -0.92
SSBP1-212ENST00000489378 VAMP7P51809 220 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 CENPCQ03188 943 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 PTK2BQ14289 1009 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 ARHGAP44Q17R89 818 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 PMF1Q6P1K2 205 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 FAM173BQ6P4H8 233 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 LVRNQ6Q4G3 990 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 FSTL5Q8N475 847 aaPredicted RBP9.33□□□□□ -0.92
SSBP1-212ENST00000489378 ATP11CQ8NB49 1132 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 RCBTB1Q8NDN9 531 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 LRRN4Q8WUT4 740 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 SCG3Q8WXD2 468 aaKnown RBP9.33□□□□□ -0.92
SSBP1-212ENST00000489378 CENPTQ96BT3 561 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 DHX58Q96C10 678 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 EEF2KMTQ96G04 330 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 PRMT1Q99873 361 aaKnown RBP9.33□□□□□ -0.92
SSBP1-212ENST00000489378 C7orf25Q9BPX7 421 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 BLZF1Q9H2G9 400 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 TNKS2Q9H2K2 1166 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 RDH14Q9HBH5 336 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 HESX1Q9UBX0 185 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms