RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 ERVMER34-1Q9H9K5 563 aa25.35■■□□□ 1.65
HMGN1-217ENST00000489072 DONSONQ9NYP3 566 aa25.35■■□□□ 1.65
HMGN1-217ENST00000489072 GGT7Q9UJ14 662 aa25.35■■□□□ 1.65
HMGN1-217ENST00000489072 ITM2BQ9Y287 266 aa25.35■■□□□ 1.65
HMGN1-217ENST00000489072 ASPMQ8IZT6 3477 aa25.34■■□□□ 1.65
HMGN1-217ENST00000489072 INSIG1O15503 277 aa25.34■■□□□ 1.65
HMGN1-217ENST00000489072 TRIM16O95361 564 aa25.34■■□□□ 1.65
HMGN1-217ENST00000489072 IGSF6O95976 241 aa25.34■■□□□ 1.65
HMGN1-217ENST00000489072 EIF4A3P38919 411 aaKnown RBP25.34■■□□□ 1.65
HMGN1-217ENST00000489072 HCAR3P49019 387 aa25.34■■□□□ 1.65
HMGN1-217ENST00000489072 OVGP1Q12889 678 aa25.34■■□□□ 1.65
HMGN1-217ENST00000489072 DPYSQ14117 519 aa25.34■■□□□ 1.65
HMGN1-217ENST00000489072 TXNRD3NBQ6F5E7 133 aa25.34■■□□□ 1.65
HMGN1-217ENST00000489072 GDPD4Q6W3E5 623 aa25.34■■□□□ 1.65
HMGN1-217ENST00000489072 RAB44Q7Z6P3 723 aaPredicted RBP25.34■■□□□ 1.65
HMGN1-217ENST00000489072 NIPA2Q8N8Q9 360 aa25.34■■□□□ 1.65
HMGN1-217ENST00000489072 SAP25Q8TEE9 199 aa25.34■■□□□ 1.65
HMGN1-217ENST00000489072 EXOC2Q96KP1 924 aa25.34■■□□□ 1.65
HMGN1-217ENST00000489072 CDC6Q99741 560 aa25.34■■□□□ 1.65
HMGN1-217ENST00000489072 OSBPL1AQ9BXW6 950 aa25.34■■□□□ 1.65
HMGN1-217ENST00000489072 TOR4AQ9NXH8 423 aa25.34■■□□□ 1.65
HMGN1-217ENST00000489072 ANAPC7Q9UJX3 599 aa25.34■■□□□ 1.65
HMGN1-217ENST00000489072 KLK13Q9UKR3 277 aa25.34■■□□□ 1.65
HMGN1-217ENST00000489072 MFHAS1Q9Y4C4 1052 aa25.34■■□□□ 1.65
HMGN1-217ENST00000489072 TDRD6O60522 2096 aaKnown RBP25.33■■□□□ 1.65
HMGN1-217ENST00000489072 ARHGAP42A6NI28 874 aa25.33■■□□□ 1.65
HMGN1-217ENST00000489072 CBFA2T2O43439 604 aa25.33■■□□□ 1.65
HMGN1-217ENST00000489072 ATXN1LP0C7T5 689 aaKnown RBP25.33■■□□□ 1.65
HMGN1-217ENST00000489072 HNRNPA2B1P22626 353 aaKnown RBP25.33■■□□□ 1.65
HMGN1-217ENST00000489072 EPHA8P29322 1005 aaPredicted RBP25.33■■□□□ 1.65
HMGN1-217ENST00000489072 AKT2P31751 481 aa25.33■■□□□ 1.65
HMGN1-217ENST00000489072 CLDN2P57739 230 aa25.33■■□□□ 1.65
HMGN1-217ENST00000489072 RPS21P63220 83 aaKnown RBP25.33■■□□□ 1.65
HMGN1-217ENST00000489072 MAPK8IP2Q13387 824 aaPredicted RBP25.33■■□□□ 1.65
HMGN1-217ENST00000489072 PIGHQ14442 188 aaPredicted RBP25.33■■□□□ 1.65
HMGN1-217ENST00000489072 DPYSL2Q16555 572 aa25.33■■□□□ 1.65
HMGN1-217ENST00000489072 SPECC1LQ69YQ0 1117 aa25.33■■□□□ 1.65
HMGN1-217ENST00000489072 KIAA1161Q6NSJ0 714 aa25.33■■□□□ 1.65
HMGN1-217ENST00000489072 GCNT7Q6ZNI0 430 aa25.33■■□□□ 1.65
HMGN1-217ENST00000489072 RNF214Q8ND24 703 aa25.33■■□□□ 1.65
HMGN1-217ENST00000489072 RAB7BQ96AH8 199 aa25.33■■□□□ 1.65
HMGN1-217ENST00000489072 KLHDC7BQ96G42 594 aa25.33■■□□□ 1.65
HMGN1-217ENST00000489072 FEM1CQ96JP0 617 aa25.33■■□□□ 1.65
HMGN1-217ENST00000489072 SLC17A9Q9BYT1 436 aa25.33■■□□□ 1.65
HMGN1-217ENST00000489072 ZWILCHQ9H900 591 aa25.33■■□□□ 1.65
HMGN1-217ENST00000489072 ANKRD36A6QL64 1941 aa25.33■■□□□ 1.65
HMGN1-217ENST00000489072 MAGEC1O60732 1142 aa25.32■■□□□ 1.64
HMGN1-217ENST00000489072 THEGLP0DJG4 465 aa25.32■■□□□ 1.64
HMGN1-217ENST00000489072 RARAP10276 462 aa25.32■■□□□ 1.64
HMGN1-217ENST00000489072 RXRGP48443 463 aa25.32■■□□□ 1.64
HMGN1-217ENST00000489072 ARRB1P49407 418 aaPredicted RBP25.32■■□□□ 1.64
HMGN1-217ENST00000489072 ZNF135P52742 658 aaPredicted RBP25.32■■□□□ 1.64
HMGN1-217ENST00000489072 BNIP3Q12983 259 aa25.32■■□□□ 1.64
HMGN1-217ENST00000489072 BOLA3Q53S33 107 aa25.32■■□□□ 1.64
HMGN1-217ENST00000489072 LRRC73Q5JTD7 316 aa25.32■■□□□ 1.64
HMGN1-217ENST00000489072 ARHGAP36Q6ZRI8 547 aa25.32■■□□□ 1.64
HMGN1-217ENST00000489072 TP53INP2Q8IXH6 220 aa25.32■■□□□ 1.64
HMGN1-217ENST00000489072 ADAMTS14Q8WXS8 1223 aa25.32■■□□□ 1.64
HMGN1-217ENST00000489072 HSPH1Q92598 858 aa25.32■■□□□ 1.64
HMGN1-217ENST00000489072 DNAJC7Q99615 494 aa25.32■■□□□ 1.64
HMGN1-217ENST00000489072 TMEM121BQ9BXQ6 578 aaPredicted RBP25.32■■□□□ 1.64
HMGN1-217ENST00000489072 IP6K2Q9UHH9 426 aa25.32■■□□□ 1.64
HMGN1-217ENST00000489072 APOBEC2Q9Y235 224 aaKnown RBP25.32■■□□□ 1.64
HMGN1-217ENST00000489072 PTPRBP23467 1997 aa25.32■■□□□ 1.64
HMGN1-217ENST00000489072 COL5A1P20908 1838 aaPredicted RBP25.32■■□□□ 1.64
HMGN1-217ENST00000489072 RAD51BO15315 384 aa25.31■■□□□ 1.64
HMGN1-217ENST00000489072 YKT6O15498 198 aa25.31■■□□□ 1.64
HMGN1-217ENST00000489072 ITGAVP06756 1048 aa25.31■■□□□ 1.64
HMGN1-217ENST00000489072 SLC25A11Q02978 314 aaKnown RBP25.31■■□□□ 1.64
HMGN1-217ENST00000489072 RAD51Q06609 339 aa25.31■■□□□ 1.64
HMGN1-217ENST00000489072 POLNQ7Z5Q5 900 aa25.31■■□□□ 1.64
HMGN1-217ENST00000489072 VSTM4Q8IW00 320 aa25.31■■□□□ 1.64
HMGN1-217ENST00000489072 OXR1Q8N573 874 aa25.31■■□□□ 1.64
HMGN1-217ENST00000489072 OR13H1Q8NG92 308 aa25.31■■□□□ 1.64
HMGN1-217ENST00000489072 C1QTNF2Q9BXJ5 285 aa25.31■■□□□ 1.64
HMGN1-217ENST00000489072 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.31■■□□□ 1.64
HMGN1-217ENST00000489072 ETNK2Q9NVF9 386 aa25.31■■□□□ 1.64
HMGN1-217ENST00000489072 NEUROG3Q9Y4Z2 214 aa25.31■■□□□ 1.64
HMGN1-217ENST00000489072 IGLON5A6NGN9 336 aa25.3■■□□□ 1.64
HMGN1-217ENST00000489072 C1QTNF9BB2RNN3 333 aa25.3■■□□□ 1.64
HMGN1-217ENST00000489072 H3BRJ5 948 aa25.3■■□□□ 1.64
HMGN1-217ENST00000489072 DFFAO00273 331 aa25.3■■□□□ 1.64
HMGN1-217ENST00000489072 AREL1O15033 823 aa25.3■■□□□ 1.64
HMGN1-217ENST00000489072 TSPAN6O43657 245 aa25.3■■□□□ 1.64
HMGN1-217ENST00000489072 PIGNO95427 931 aa25.3■■□□□ 1.64
HMGN1-217ENST00000489072 PAK4O96013 591 aaPredicted RBP25.3■■□□□ 1.64
HMGN1-217ENST00000489072 C1QTNF9P0C862 333 aa25.3■■□□□ 1.64
HMGN1-217ENST00000489072 ITIH2P19823 946 aa25.3■■□□□ 1.64
HMGN1-217ENST00000489072 RGRP47804 291 aa25.3■■□□□ 1.64
HMGN1-217ENST00000489072 TRIM14Q14142 442 aa25.3■■□□□ 1.64
HMGN1-217ENST00000489072 ASTE1Q2TB18 679 aaPredicted RBP25.3■■□□□ 1.64
HMGN1-217ENST00000489072 INAVAQ3KP66 663 aa25.3■■□□□ 1.64
HMGN1-217ENST00000489072 KANSL1Q7Z3B3 1105 aa25.3■■□□□ 1.64
HMGN1-217ENST00000489072 ABI3BPQ7Z7G0 1075 aa25.3■■□□□ 1.64
HMGN1-217ENST00000489072 CPNE8Q86YQ8 564 aa25.3■■□□□ 1.64
HMGN1-217ENST00000489072 OR8K1Q8NGG5 319 aa25.3■■□□□ 1.64
HMGN1-217ENST00000489072 PACSIN1Q9BY11 444 aa25.3■■□□□ 1.64
HMGN1-217ENST00000489072 CPEB1Q9BZB8 566 aaKnown RBP25.3■■□□□ 1.64
HMGN1-217ENST00000489072 LRRK1Q38SD2 2015 aa25.3■■□□□ 1.64
HMGN1-217ENST00000489072 PLXNB3Q9ULL4 1909 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms