RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 FAM182AQ5T1J6 154 aa12.53□□□□□ -0.4
TMEM39B-208ENST00000487305 WSCD1Q658N2 575 aa12.53□□□□□ -0.4
TMEM39B-208ENST00000487305 PRMT9Q6P2P2 845 aa12.53□□□□□ -0.4
TMEM39B-208ENST00000487305 ATPAF2Q8N5M1 289 aa12.53□□□□□ -0.4
TMEM39B-208ENST00000487305 PACRGLQ8N7B6 248 aa12.53□□□□□ -0.4
TMEM39B-208ENST00000487305 SPAG4Q9NPE6 437 aa12.53□□□□□ -0.4
TMEM39B-208ENST00000487305 GNEQ9Y223 722 aaKnown RBP12.53□□□□□ -0.4
TMEM39B-208ENST00000487305 ARHGEF37A1IGU5 675 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 SDHDO14521 159 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 BEST1O76090 585 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 SORBS2O94875 1100 aaKnown RBP12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 VAPBO95292 243 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 TFAP2AP05549 437 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 MYL3P08590 195 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 SLC7A1P30825 629 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 PSME3P61289 254 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 TUBA4AP68366 448 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 ADAM17P78536 824 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 NRG1Q02297 640 aaPredicted RBP12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 SOX4Q06945 474 aaPredicted RBP12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 APOFQ13790 326 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 ACAP2Q15057 778 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 LRRC23Q53EV4 343 aaPredicted RBP12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 TRIM67Q6ZTA4 783 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 EP400NLQ6ZTU2 488 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 HFE2Q6ZVN8 426 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 DPP9Q86TI2 863 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 SATL1Q86VE3 508 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 SHKBP1Q8TBC3 707 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 NDRG1Q92597 394 aaKnown RBP12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 CDCA5Q96FF9 252 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 SENP8Q96LD8 212 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 ZNF597Q96LX8 424 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 CATSPER2Q96P56 530 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 SMOQ99835 787 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 TINF2Q9BSI4 451 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 TRIM15Q9C019 465 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 TSPYL2Q9H2G4 693 aaPredicted RBP12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 ARNT2Q9HBZ2 717 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 TREX1Q9NSU2 369 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 ARHGEF38Q9NXL2 777 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 GJD2Q9UKL4 321 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 AP4S1Q9Y587 144 aa12.52□□□□□ -0.4
TMEM39B-208ENST00000487305 HEATR9A2RTY3 570 aa12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 CLDN5O00501 218 aa12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 UBDO15205 165 aa12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 CFLARO15519 480 aa12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 PHGDHO43175 533 aaKnown RBP12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 IPO13O94829 963 aaKnown RBP12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 SNRPB2P08579 225 aaKnown RBP12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 PSMC3P17980 439 aa12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 ADRA1AP35348 466 aa12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 PFKPQ01813 784 aa12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 BIRC2Q13490 618 aa12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 GRB14Q14449 540 aa12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 MAPRE1Q15691 268 aaKnown RBP12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 SLC41A1Q8IVJ1 513 aa12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 TMEM102Q8N9M5 508 aaPredicted RBP12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 PCYOX1LQ8NBM8 494 aa12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 RNF169Q8NCN4 708 aa12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 EME1Q96AY2 570 aa12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 CYP2S1Q96SQ9 504 aa12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 KATNAL1Q9BW62 490 aa12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 SLC2A11Q9BYW1 496 aa12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 COPS7BQ9H9Q2 264 aaPredicted RBP12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 CRTAC1Q9NQ79 661 aa12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 TMPRSS4Q9NRS4 437 aa12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 VPS45Q9NRW7 570 aa12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 FBXO5Q9UKT4 447 aa12.52□□□□□ -0.41
TMEM39B-208ENST00000487305 PSMD12O00232 456 aaPredicted RBP12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 GPC4O75487 556 aa12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 ASLP04424 464 aa12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 RPLP2P05387 115 aaKnown RBP12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 LTA4HP09960 611 aaKnown RBP12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 C7P10643 843 aa12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 CPB1P15086 417 aa12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 TPH1P17752 444 aa12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 GABRB3P28472 473 aa12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 GRIA2P42262 883 aa12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 GTF2A2P52657 109 aa12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 PEX6Q13608 980 aa12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 PPM1LQ5SGD2 360 aa12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 LDLRAD1Q5T700 205 aa12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 NEPROQ6NW34 567 aa12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 CCNYL1Q8N7R7 359 aa12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 SMG8Q8ND04 991 aaKnown RBP12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 HM13Q8TCT9 377 aa12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 PEX13Q92968 403 aa12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 FSD1LQ9BXM9 530 aa12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 RHOBTB2Q9BYZ6 727 aa12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 UPF3AQ9H1J1 476 aaKnown RBP12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 CDHR5Q9HBB8 845 aa12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 CHST12Q9NRB3 414 aa12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 KLK14Q9P0G3 267 aa12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 DSEQ9UL01 958 aa12.51□□□□□ -0.41
TMEM39B-208ENST00000487305 E2F8A0AVK6 867 aa12.5□□□□□ -0.41
TMEM39B-208ENST00000487305 FAM155AB1AL88 458 aaPredicted RBP12.5□□□□□ -0.41
TMEM39B-208ENST00000487305 HHLA1C9JL84 531 aa12.5□□□□□ -0.41
TMEM39B-208ENST00000487305 TRIM24O15164 1050 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms