RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 NMBRP28336 390 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 MAPK8P45983 427 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 SGSHP51688 502 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 ZXDBP98169 803 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 ITIH4Q14624 930 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 CYTH1Q15438 398 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 TSTD2Q5T7W7 516 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 RNF219Q5W0B1 726 aaPredicted RBP11.76□□□□□ -0.53
PRKCB-207ENST00000486868 RETSATQ6NUM9 610 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 LVRNQ6Q4G3 990 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 CMTM8Q8IZV2 173 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 OR52K2Q8NGK3 314 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 SHKBP1Q8TBC3 707 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 RAB3IL1Q8TBN0 382 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 MICAL1Q8TDZ2 1067 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 USP13Q92995 863 aaPredicted RBP11.76□□□□□ -0.53
PRKCB-207ENST00000486868 IFT43Q96FT9 208 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 TRIB3Q96RU7 358 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 APOL2Q9BQE5 337 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 CORO1BQ9BR76 489 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 TRIM56Q9BRZ2 755 aaKnown RBP11.76□□□□□ -0.53
PRKCB-207ENST00000486868 C17orf80Q9BSJ5 609 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 FEM1AQ9BSK4 669 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 SPON2Q9BUD6 331 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 C2orf49Q9BVC5 232 aaPredicted RBP11.76□□□□□ -0.53
PRKCB-207ENST00000486868 IQCGQ9H095 443 aaKnown RBP11.76□□□□□ -0.53
PRKCB-207ENST00000486868 FAM107BQ9H098 131 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 MUC3BQ9H195 1237 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 RHOJQ9H4E5 214 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 MAN1C1Q9NR34 630 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 C20orf96Q9NUD7 363 aaPredicted RBP11.76□□□□□ -0.53
PRKCB-207ENST00000486868 KIAA1522Q9P206 1035 aaPredicted RBP11.76□□□□□ -0.53
PRKCB-207ENST00000486868 CFAP97Q9P2B7 532 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 TBC1D14Q9P2M4 693 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 DCDC2Q9UHG0 476 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 GRID1Q9ULK0 1009 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 KIAA1671Q9BY89 1806 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 FOXO6A8MYZ6 492 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 MUSKO15146 869 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 GRM6O15303 877 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 BIRC5O15392 142 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 TSPAN3O60637 253 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 UGT1A9O60656 530 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 GLRA3O75311 464 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 PIAS1O75925 651 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 CD160O95971 181 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 RHOP08100 348 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 VIMP08670 466 aaKnown RBP11.75□□□□□ -0.53
PRKCB-207ENST00000486868 ERVK-10P10266 1014 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 SERPINB8P50452 374 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 CSRP3P50461 194 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 MAXP61244 160 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 ARF5P84085 180 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 CDH18Q13634 790 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 LRRC14Q15048 493 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 HSP90AA5PQ58FG0 334 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 PRSS36Q5K4E3 855 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 GPR158Q5T848 1215 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 CCDC91Q7Z6B0 441 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 YTHDF3Q7Z739 585 aaKnown RBP11.75□□□□□ -0.53
PRKCB-207ENST00000486868 LRRC34Q8IZ02 419 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 CACNA2D3Q8IZS8 1091 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 MGARPQ8TDB4 240 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 BRSK1Q8TDC3 778 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 SRPK1Q96SB4 655 aaKnown RBP11.75□□□□□ -0.53
PRKCB-207ENST00000486868 GPR22Q99680 433 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 MFSD1Q9H3U5 465 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 UGT1A7Q9HAW7 530 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 UGT1A10Q9HAW8 530 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 UGT1A8Q9HAW9 530 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 PIH1D1Q9NWS0 290 aaKnown RBP11.75□□□□□ -0.53
PRKCB-207ENST00000486868 CHD5Q8TDI0 1954 aa11.75□□□□□ -0.53
PRKCB-207ENST00000486868 MYO18AQ92614 2054 aaKnown RBP11.75□□□□□ -0.53
PRKCB-207ENST00000486868 TCP11X1B4DZS4 312 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 SLC9A3R1O14745 358 aaPredicted RBP11.74□□□□□ -0.53
PRKCB-207ENST00000486868 SNX3O60493 162 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 ALDOAP04075 364 aaKnown RBP11.74□□□□□ -0.53
PRKCB-207ENST00000486868 COL6A2P12110 1019 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 HOXB8P17481 243 aaPredicted RBP11.74□□□□□ -0.53
PRKCB-207ENST00000486868 SYN1P17600 705 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 AVPR1AP37288 418 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 CCR2P41597 374 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 RPL26P61254 145 aaKnown RBP11.74□□□□□ -0.53
PRKCB-207ENST00000486868 AP1S1P61966 158 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 PDE1BQ01064 536 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 USP4Q13107 963 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 GPM6BQ13491 265 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 THOC5Q13769 683 aaKnown RBP11.74□□□□□ -0.53
PRKCB-207ENST00000486868 DMC1Q14565 340 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 IHHQ14623 411 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 POU6F1Q14863 301 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 SIRPB2Q5JXA9 342 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 MROH9Q5TGP6 573 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 ESRP1Q6NXG1 681 aaKnown RBP11.74□□□□□ -0.53
PRKCB-207ENST00000486868 NCEH1Q6PIU2 408 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 C6orf89Q6UWU4 347 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 CES3Q6UWW8 571 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 STRA8Q7Z7C7 330 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 TAX1BP1Q86VP1 789 aa11.74□□□□□ -0.53
PRKCB-207ENST00000486868 MFN1Q8IWA4 741 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms