RNA–Protein interactions for RNA: ENST00000486509.1

CDC7-204, Transcript of cell division cycle 7, humanhuman

TSL 3

Gene CDC7, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-204ENST00000486509 TMEM63AO94886 807 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 TUBB4AP04350 444 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 ARP10275 920 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 CYP2A6P11509 494 aaPredicted RBP4.44□□□□□ -1.7
CDC7-204ENST00000486509 IDEP14735 1019 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 CD19P15391 556 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 GPTP24298 496 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 HOXC13P31276 330 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 CLK1P49759 484 aaKnown RBP4.44□□□□□ -1.7
CDC7-204ENST00000486509 AP2B1P63010 937 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 PLIN5Q00G26 463 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 CDC16Q13042 620 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 MTAPQ13126 283 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 BECN1Q14457 450 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 MAPKAPK3Q16644 382 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 HSP90AB3PQ58FF7 597 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 AWAT1Q58HT5 328 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 RILPL1Q5EBL4 403 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 HECTD3Q5T447 861 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 TMTC4Q5T4D3 741 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 GRHL2Q6ISB3 625 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 NFRKBQ6P4R8 1299 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 CRTC1Q6UUV9 634 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 SERPINA13PQ6UXR4 307 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 KIAA0408Q6ZU52 694 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 BBS12Q6ZW61 710 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 MOB2Q70IA6 237 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 RRAGAQ7L523 313 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 VSIG1Q86XK7 387 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 APOBEC3FQ8IUX4 373 aaKnown RBP4.44□□□□□ -1.7
CDC7-204ENST00000486509 SLC44A2Q8IWA5 706 aaPredicted RBP4.44□□□□□ -1.7
CDC7-204ENST00000486509 NDUFAF2Q8N183 169 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 NGEFQ8N5V2 710 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 MBD3L2Q8NHZ7 208 aaPredicted RBP4.44□□□□□ -1.7
CDC7-204ENST00000486509 EDC3Q96F86 508 aaKnown RBP4.44□□□□□ -1.7
CDC7-204ENST00000486509 KAZALD1Q96I82 304 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 CDHR1Q96JP9 859 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 RTKNQ9BST9 563 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 SEMA4CQ9C0C4 833 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 PCDHAC1Q9H158 963 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 PANK3Q9H999 370 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 SNX15Q9NRS6 342 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 GAR1Q9NY12 217 aaKnown RBP4.44□□□□□ -1.7
CDC7-204ENST00000486509 SNX5Q9Y5X3 404 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 COL4A1P02462 1669 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 ECM29Q5VYK3 1845 aa4.44□□□□□ -1.7
CDC7-204ENST00000486509 BTBD19C9JJ37 291 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 H3BNC9 293 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 H7C0S8 307 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 PPP6CO00743 305 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 AP3D1O14617 1153 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 CBFA2T3O75081 653 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 HSPA4LO95757 839 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 CHRM5P08912 532 aaPredicted RBP4.43□□□□□ -1.7
CDC7-204ENST00000486509 PRR35P0CG20 571 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 PORP16435 677 aaPredicted RBP4.43□□□□□ -1.7
CDC7-204ENST00000486509 EGR1P18146 543 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 SFPQP23246 707 aaKnown RBP eCLIP4.43□□□□□ -1.7
CDC7-204ENST00000486509 CERS1P27544 350 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 EPHB2P29323 1055 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 MAPK4P31152 587 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 EIF4A1P60842 406 aaKnown RBP4.43□□□□□ -1.7
CDC7-204ENST00000486509 ST3GAL2Q16842 350 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 SUPT20HL1Q3ZLR7 823 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 ATG16L1Q676U5 607 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 TMTC3Q6ZXV5 915 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 R3HCC1LQ7Z5L2 792 aaKnown RBP4.43□□□□□ -1.7
CDC7-204ENST00000486509 YTHDF3Q7Z739 585 aaKnown RBP4.43□□□□□ -1.7
CDC7-204ENST00000486509 NEK8Q86SG6 692 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 GALNT13Q8IUC8 556 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 TMEM57Q8N5G2 664 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 DEFB123Q8N688 67 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 OR6Y1Q8NGX8 325 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 MAFAQ8NHW3 353 aaPredicted RBP4.43□□□□□ -1.7
CDC7-204ENST00000486509 SUN3Q8TAQ9 357 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 TBC1D16Q8TBP0 767 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 CREB3L4Q8TEY5 395 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 RNF125Q96EQ8 232 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 TRAPPC9Q96Q05 1148 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 TWSG1Q9GZX9 223 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 ACAD9Q9H845 621 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 ZBTB26Q9HCK0 441 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 PDGFCQ9NRA1 345 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 MTMR10Q9NXD2 777 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.43□□□□□ -1.7
CDC7-204ENST00000486509 POLLQ9UGP5 575 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 ZNF112Q9UJU3 913 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 TBX20Q9UMR3 447 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 PCDHGB4Q9UN71 923 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 KNSTRNQ9Y448 316 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 SH3TC1Q8TE82 1336 aa4.43□□□□□ -1.7
CDC7-204ENST00000486509 COL2A1P02458 1487 aaPredicted RBP4.43□□□□□ -1.7
CDC7-204ENST00000486509 XIRP2A4UGR9 3374 aa4.42□□□□□ -1.7
CDC7-204ENST00000486509 hCG_1807616A0A1W2PRN6 198 aa4.42□□□□□ -1.7
CDC7-204ENST00000486509 INO80B-WBP1J3KQ70 363 aa4.42□□□□□ -1.7
CDC7-204ENST00000486509 DNPH1O43598 174 aa4.42□□□□□ -1.7
CDC7-204ENST00000486509 PRAMEF2O60811 474 aa4.42□□□□□ -1.7
CDC7-204ENST00000486509 KRT38O76015 456 aa4.42□□□□□ -1.7
CDC7-204ENST00000486509 WDR47O94967 919 aa4.42□□□□□ -1.7
CDC7-204ENST00000486509 CLTBP09497 229 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms