RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 SELENOOQ9BVL4 669 aa18.29■□□□□ 0.52
ATG4B-221ENST00000483778 TCEAL2Q9H3H9 227 aaPredicted RBP18.29■□□□□ 0.52
ATG4B-221ENST00000483778 TAS2R14Q9NYV8 317 aa18.29■□□□□ 0.52
ATG4B-221ENST00000483778 CLCA2Q9UQC9 943 aa18.29■□□□□ 0.52
ATG4B-221ENST00000483778 PCDHB1Q9Y5F3 818 aa18.29■□□□□ 0.52
ATG4B-221ENST00000483778 AREL1O15033 823 aa18.28■□□□□ 0.52
ATG4B-221ENST00000483778 SCAMP1O15126 338 aa18.28■□□□□ 0.52
ATG4B-221ENST00000483778 BUB1O43683 1085 aa18.28■□□□□ 0.52
ATG4B-221ENST00000483778 TMCC1O94876 653 aa18.28■□□□□ 0.52
ATG4B-221ENST00000483778 GSRP00390 522 aa18.28■□□□□ 0.52
ATG4B-221ENST00000483778 CKMT1AP12532 417 aa18.28■□□□□ 0.52
ATG4B-221ENST00000483778 ATP1A3P13637 1013 aa18.28■□□□□ 0.52
ATG4B-221ENST00000483778 TIMP2P16035 220 aa18.28■□□□□ 0.52
ATG4B-221ENST00000483778 EIF2B5Q13144 721 aaKnown RBP18.28■□□□□ 0.52
ATG4B-221ENST00000483778 CYTH1Q15438 398 aa18.28■□□□□ 0.52
ATG4B-221ENST00000483778 KYAT3Q6YP21 454 aaKnown RBP18.28■□□□□ 0.52
ATG4B-221ENST00000483778 C3orf20Q8ND61 904 aa18.28■□□□□ 0.52
ATG4B-221ENST00000483778 CENPTQ96BT3 561 aa18.28■□□□□ 0.52
ATG4B-221ENST00000483778 NXPE2Q96DL1 559 aa18.28■□□□□ 0.52
ATG4B-221ENST00000483778 HMCESQ96FZ2 354 aa18.28■□□□□ 0.52
ATG4B-221ENST00000483778 LENG8Q96PV6 779 aaPredicted RBP18.28■□□□□ 0.52
ATG4B-221ENST00000483778 NRSN2Q9GZP1 204 aa18.28■□□□□ 0.52
ATG4B-221ENST00000483778 SEPT11Q9NVA2 429 aaKnown RBP18.28■□□□□ 0.52
ATG4B-221ENST00000483778 GPATCH2LQ9NWQ4 482 aa18.28■□□□□ 0.52
ATG4B-221ENST00000483778 FZD10Q9ULW2 581 aa18.28■□□□□ 0.52
ATG4B-221ENST00000483778 HPCAL4Q9UM19 191 aa18.28■□□□□ 0.52
ATG4B-221ENST00000483778 TEX33O43247 280 aa18.27■□□□□ 0.52
ATG4B-221ENST00000483778 TSPAN6O43657 245 aa18.27■□□□□ 0.52
ATG4B-221ENST00000483778 OPA1O60313 960 aa18.27■□□□□ 0.52
ATG4B-221ENST00000483778 BRINP1O60477 761 aa18.27■□□□□ 0.52
ATG4B-221ENST00000483778 MMP20O60882 483 aa18.27■□□□□ 0.52
ATG4B-221ENST00000483778 CSF2P04141 144 aa18.27■□□□□ 0.52
ATG4B-221ENST00000483778 EPHB2P29323 1055 aa18.27■□□□□ 0.52
ATG4B-221ENST00000483778 ETFBP38117 255 aa18.27■□□□□ 0.52
ATG4B-221ENST00000483778 ZNF143P52747 638 aaPredicted RBP18.27■□□□□ 0.52
ATG4B-221ENST00000483778 SNRPD1P62314 119 aaKnown RBP18.27■□□□□ 0.52
ATG4B-221ENST00000483778 SGCGQ13326 291 aa18.27■□□□□ 0.52
ATG4B-221ENST00000483778 CDCP2Q5VXM1 449 aa18.27■□□□□ 0.52
ATG4B-221ENST00000483778 GDPD4Q6W3E5 623 aa18.27■□□□□ 0.52
ATG4B-221ENST00000483778 NYAP1Q6ZVC0 841 aa18.27■□□□□ 0.52
ATG4B-221ENST00000483778 IRF2BP2Q7Z5L9 587 aa18.27■□□□□ 0.52
ATG4B-221ENST00000483778 TTC7BQ86TV6 843 aa18.27■□□□□ 0.52
ATG4B-221ENST00000483778 RTL3Q8N8U3 475 aaKnown RBP18.27■□□□□ 0.52
ATG4B-221ENST00000483778 ZNF548Q8NEK5 533 aaPredicted RBP18.27■□□□□ 0.52
ATG4B-221ENST00000483778 IFT43Q96FT9 208 aa18.27■□□□□ 0.52
ATG4B-221ENST00000483778 MCEEQ96PE7 176 aa18.27■□□□□ 0.52
ATG4B-221ENST00000483778 ERGIC2Q96RQ1 377 aa18.27■□□□□ 0.52
ATG4B-221ENST00000483778 RETREG1Q9H6L5 497 aa18.27■□□□□ 0.52
ATG4B-221ENST00000483778 MBNL1Q9NR56 388 aaKnown RBP18.27■□□□□ 0.52
ATG4B-221ENST00000483778 NLGN3Q9NZ94 848 aa18.27■□□□□ 0.52
ATG4B-221ENST00000483778 MGAQ8IWI9 3026 aa18.27■□□□□ 0.51
ATG4B-221ENST00000483778 LRP4O75096 1905 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 CXorf51AA0A1B0GTR3 108 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 RASA4BC9J798 803 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 NEMP1O14524 444 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 RASA4O43374 803 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 CREB3O43889 395 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 CALB1P05937 261 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 TPM2P07951 284 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 IGFALSP35858 605 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 PFN3P60673 137 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 E2F1Q01094 437 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 MYL5Q02045 173 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 C1QBPQ07021 282 aaKnown RBP18.26■□□□□ 0.51
ATG4B-221ENST00000483778 SERINC3Q13530 473 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 PDE1CQ14123 709 aaPredicted RBP18.26■□□□□ 0.51
ATG4B-221ENST00000483778 ZNF354CQ86Y25 554 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 DCP2Q8IU60 420 aaKnown RBP18.26■□□□□ 0.51
ATG4B-221ENST00000483778 MCOLN2Q8IZK6 566 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 RBFAQ8N0V3 343 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 CACTIN-AS1Q8N1I8 211 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 ARFGAP1Q8N6T3 406 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 EXOC2Q96KP1 924 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 SYT11Q9BT88 431 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 TTYH3Q9C0H2 523 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 ANO10Q9NW15 660 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 LHX3Q9UBR4 397 aa18.26■□□□□ 0.51
ATG4B-221ENST00000483778 FPGTO14772 594 aa18.25■□□□□ 0.51
ATG4B-221ENST00000483778 GCATO75600 419 aa18.25■□□□□ 0.51
ATG4B-221ENST00000483778 NME1P15531 152 aaKnown RBP18.25■□□□□ 0.51
ATG4B-221ENST00000483778 JUNDP17535 347 aa18.25■□□□□ 0.51
ATG4B-221ENST00000483778 RABIFP47224 123 aa18.25■□□□□ 0.51
ATG4B-221ENST00000483778 HNRNPKP61978 463 aaKnown RBP eCLIP18.25■□□□□ 0.514e-8■■■■□ 24.7
ATG4B-221ENST00000483778 C1orf61Q13536 156 aa18.25■□□□□ 0.51
ATG4B-221ENST00000483778 CA9Q16790 459 aa18.25■□□□□ 0.51
ATG4B-221ENST00000483778 DEFB133Q30KQ1 61 aa18.25■□□□□ 0.51
ATG4B-221ENST00000483778 ACAD10Q6JQN1 1059 aa18.25■□□□□ 0.51
ATG4B-221ENST00000483778 DNAJC24Q6P3W2 148 aa18.25■□□□□ 0.51
ATG4B-221ENST00000483778 SASS6Q6UVJ0 657 aa18.25■□□□□ 0.51
ATG4B-221ENST00000483778 VPS36Q86VN1 386 aa18.25■□□□□ 0.51
ATG4B-221ENST00000483778 FAM181AQ8N9Y4 354 aa18.25■□□□□ 0.51
ATG4B-221ENST00000483778 ASB12Q8WXK4 309 aa18.25■□□□□ 0.51
ATG4B-221ENST00000483778 RAB7BQ96AH8 199 aa18.25■□□□□ 0.51
ATG4B-221ENST00000483778 CNPY3Q9BT09 278 aa18.25■□□□□ 0.51
ATG4B-221ENST00000483778 WRAP53Q9BUR4 548 aaKnown RBP18.25■□□□□ 0.51
ATG4B-221ENST00000483778 IPO11Q9UI26 975 aaKnown RBP18.25■□□□□ 0.51
ATG4B-221ENST00000483778 COQ6Q9Y2Z9 468 aa18.25■□□□□ 0.51
ATG4B-221ENST00000483778 DAAM1Q9Y4D1 1078 aa18.25■□□□□ 0.51
ATG4B-221ENST00000483778 J3KR12 359 aa18.24■□□□□ 0.51
ATG4B-221ENST00000483778 BUB1BO60566 1050 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms