RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 HEXIM2Q96MH2 286 aaKnown RBP13.57□□□□□ -0.24
DFFB-209ENST00000477548 ZMAT2Q96NC0 199 aaKnown RBP13.57□□□□□ -0.24
DFFB-209ENST00000477548 FCRL3Q96P31 734 aaPredicted RBP13.57□□□□□ -0.24
DFFB-209ENST00000477548 ALPK1Q96QP1 1244 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 C9orf16Q9BUW7 83 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 NDEL1Q9GZM8 345 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 GBA3Q9H227 469 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 PORCNQ9H237 461 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 VRTNQ9H8Y1 702 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 NANOGQ9H9S0 305 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 PXMP2Q9NR77 195 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 ARMC1Q9NVT9 282 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 SEPT10Q9P0V9 454 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 VPS51Q9UID3 782 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 SLC39A10Q9ULF5 831 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 ST14Q9Y5Y6 855 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 TRPC5OSA6NMA1 111 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 MRASO14807 208 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 CABYRO75952 493 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 SDC4P31431 198 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 GNL1P36915 607 aaPredicted RBP13.57□□□□□ -0.24
DFFB-209ENST00000477548 PTGER2P43116 358 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 SLC7A2P52569 658 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 GRSF1Q12849 480 aaKnown RBP eCLIP13.57□□□□□ -0.24
DFFB-209ENST00000477548 PHKG1Q16816 387 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 EML3Q32P44 896 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 SAMD7Q7Z3H4 446 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 PDPRQ8NCN5 879 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 MROQ9BYG7 248 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 SEZ6LQ9BYH1 1024 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 ADAMTS10Q9H324 1103 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 FANCEQ9HB96 536 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 GTSE1Q9NYZ3 720 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 MAGED2Q9UNF1 606 aaPredicted RBP13.57□□□□□ -0.24
DFFB-209ENST00000477548 TCAF1Q9Y4C2 921 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 ATP6V1B2P21281 511 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 IL10P22301 178 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 HMGB2P26583 209 aaKnown RBP13.57□□□□□ -0.24
DFFB-209ENST00000477548 RGS7P49802 495 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 OSTNP61366 133 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 OCA2Q04671 838 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 PLCL1Q15111 1095 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 CLPPQ16740 277 aaPredicted RBP13.57□□□□□ -0.24
DFFB-209ENST00000477548 XKR3Q5GH77 459 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 COLGALT2Q8IYK4 626 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 LSMEM2Q8N112 164 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 DHRSXQ8N5I4 330 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 SNX31Q8N9S9 440 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.57□□□□□ -0.24
DFFB-209ENST00000477548 SHCBP1Q8NEM2 672 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 RDH11Q8TC12 318 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 GLT1D1Q96MS3 346 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 TBCBQ99426 244 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 LGMNQ99538 433 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 TUBA1CQ9BQE3 449 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 HGH1Q9BTY7 390 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 HERC2P3Q9BVR0 1158 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 RAD21L1Q9H4I0 556 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 GMPR2Q9P2T1 348 aaKnown RBP13.57□□□□□ -0.24
DFFB-209ENST00000477548 CD300AQ9UGN4 299 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 PGAP2Q9UHJ9 254 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 PSME2Q9UL46 239 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 OAZ3Q9UMX2 235 aa13.57□□□□□ -0.24
DFFB-209ENST00000477548 SDHDO14521 159 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 DDHD2O94830 711 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 FASP25445 335 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 RCVRNP35243 200 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 IDUAP35475 653 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 OPRL1P41146 370 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 NR2C2P49116 596 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 PRKAA2P54646 552 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 MLLT10P55197 1068 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 ANKRD52Q8NB46 1076 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 ACVR1CQ8NER5 493 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 OR13F1Q8NGS4 319 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 EFHD2Q96C19 240 aaPredicted RBP13.56□□□□□ -0.24
DFFB-209ENST00000477548 NRBF2Q96F24 287 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 ZNF347Q96SE7 839 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 BEGAINQ9BUH8 593 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 ELOVL4Q9GZR5 314 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 JPH1Q9HDC5 661 aaPredicted RBP13.56□□□□□ -0.24
DFFB-209ENST00000477548 CD320Q9NPF0 282 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 MYO18AQ92614 2054 aaKnown RBP13.56□□□□□ -0.24
DFFB-209ENST00000477548 DHRS12A0PJE2 317 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 CLDN25C9JDP6 229 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 SH3BP5O60239 455 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 TOMM70O94826 608 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 PSMB4P28070 264 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 LRPAP1P30533 357 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 PGGT1BP53609 377 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 TNK2Q07912 1038 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 GRM1Q13255 1194 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 INPP5AQ14642 412 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 ZNF846Q147U1 533 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 BTLAQ7Z6A9 289 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 NIM1KQ8IY84 436 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 NETO2Q8NC67 525 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 TMEM176AQ96HP8 235 aa13.56□□□□□ -0.24
DFFB-209ENST00000477548 CCM2LQ9NUG4 571 aaPredicted RBP13.56□□□□□ -0.24
DFFB-209ENST00000477548 GGA3Q9NZ52 723 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms