RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 DFNA5O60443 496 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 TMCC1O94876 653 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 PIGNO95427 931 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 PRB1P04280 392 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 SKILP12757 684 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 CKMT2P17540 419 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 GPD1P21695 349 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 ITGB7P26010 798 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 ARRB1P49407 418 aaPredicted RBP8.2□□□□□ -1.1
USP48-207ENST00000471752 NRG1Q02297 640 aaPredicted RBP8.2□□□□□ -1.1
USP48-207ENST00000471752 ZNF211Q13398 564 aaPredicted RBP8.2□□□□□ -1.1
USP48-207ENST00000471752 POLD3Q15054 466 aaPredicted RBP8.2□□□□□ -1.1
USP48-207ENST00000471752 RETSATQ6NUM9 610 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 CYP4V2Q6ZWL3 525 aaPredicted RBP8.2□□□□□ -1.1
USP48-207ENST00000471752 ZNF571Q7Z3V5 609 aaPredicted RBP8.2□□□□□ -1.1
USP48-207ENST00000471752 PTAR1Q7Z6K3 402 aaPredicted RBP8.2□□□□□ -1.1
USP48-207ENST00000471752 SLFN11Q7Z7L1 901 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 IQCHQ86VS3 1027 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 TMPRSS12Q86WS5 348 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 ZNF677Q86XU0 584 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 CPNE8Q86YQ8 564 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 MCOLN2Q8IZK6 566 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 PELI3Q8N2H9 469 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 PCDH20Q8N6Y1 951 aaKnown RBP8.2□□□□□ -1.1
USP48-207ENST00000471752 EFCAB3Q8N7B9 438 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 NEK11Q8NG66 645 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 CENPTQ96BT3 561 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 TBC1D31Q96DN5 1066 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 APOLD1Q96LR9 279 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 MCEEQ96PE7 176 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 ERGIC2Q96RQ1 377 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 KCTD15Q96SI1 283 aaPredicted RBP8.2□□□□□ -1.1
USP48-207ENST00000471752 WRAP53Q9BUR4 548 aaKnown RBP8.2□□□□□ -1.1
USP48-207ENST00000471752 CLPBQ9H078 707 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 ETNK2Q9NVF9 386 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 LHX3Q9UBR4 397 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 PCSK1NQ9UHG2 260 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 DACH1Q9UI36 760 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 HS3ST3A1Q9Y663 406 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 DOCK4Q8N1I0 1966 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 SPTY2D1-AS1A0A0U1RR47 76 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 OPA1O60313 960 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 BRINP1O60477 761 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 RAMP2O60895 175 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 MT-CO3P00414 261 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 KRT10P13645 584 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 CDK11BP21127 795 aaKnown RBP8.19□□□□□ -1.1
USP48-207ENST00000471752 TGM2P21980 687 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 HNRNPA2B1P22626 353 aaKnown RBP8.19□□□□□ -1.1
USP48-207ENST00000471752 ACP1P24666 158 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 EPHB2P29323 1055 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 AKT2P31751 481 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 IGFALSP35858 605 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 ETFBP38117 255 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 NSFP46459 744 aaKnown RBP8.19□□□□□ -1.1
USP48-207ENST00000471752 NEK3P51956 506 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 ZNF143P52747 638 aaPredicted RBP8.19□□□□□ -1.1
USP48-207ENST00000471752 MYL5Q02045 173 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 TYRO3Q06418 890 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 SLC20A2Q08357 652 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 MAMLD1Q13495 774 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 SERINC3Q13530 473 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 PDE1CQ14123 709 aaPredicted RBP8.19□□□□□ -1.1
USP48-207ENST00000471752 CDKN3Q16667 212 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 DEFB133Q30KQ1 61 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 ANO6Q4KMQ2 910 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 SLC45A4Q5BKX6 768 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 ZNF805Q5CZA5 627 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 CT47A1Q5JQC4 288 aaPredicted RBP8.19□□□□□ -1.1
USP48-207ENST00000471752 PERM1Q5SV97 790 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 FKBP15Q5T1M5 1219 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 TXNRD3NBQ6F5E7 133 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 ACAD10Q6JQN1 1059 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 NEK5Q6P3R8 708 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 ZNF783Q6ZMS7 281 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 STRADAQ7RTN6 431 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 TTC7BQ86TV6 843 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 VPS36Q86VN1 386 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 CAMK1DQ8IU85 385 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 GALNT15Q8N3T1 639 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 PLA2G15Q8NCC3 412 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 C3orf20Q8ND61 904 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 OR4C6Q8NH72 309 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 NTAN1Q96AB6 310 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 SKA1Q96BD8 255 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 FEM1CQ96JP0 617 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 SMIM14Q96QK8 99 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 PPP1R9BQ96SB3 815 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 SELENOOQ9BVL4 669 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 CEP44Q9C0F1 390 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 SLC39A8Q9C0K1 460 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 MAGEH1Q9H213 219 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 RTN4Q9NQC3 1192 aaKnown RBP8.19□□□□□ -1.1
USP48-207ENST00000471752 DYRK4Q9NR20 520 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 DKK4Q9UBT3 224 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 PCDHGA1Q9Y5H4 931 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 AK5Q9Y6K8 562 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 TRPM6Q9BX84 2022 aa8.19□□□□□ -1.1
USP48-207ENST00000471752 NYNRINQ9P2P1 1898 aaKnown RBP8.18□□□□□ -1.1
USP48-207ENST00000471752 CPED1A4D0V7 1026 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms