RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 SV2AQ7L0J3 742 aa8.79□□□□□ -1
HPS4-209ENST00000466781 PARGQ86W56 976 aa8.79□□□□□ -1
HPS4-209ENST00000466781 RORBQ92753 470 aa8.79□□□□□ -1
HPS4-209ENST00000466781 SLC38A2Q96QD8 506 aa8.79□□□□□ -1
HPS4-209ENST00000466781 COPG2Q9UBF2 871 aa8.79□□□□□ -1
HPS4-209ENST00000466781 INHAP05111 366 aa8.79□□□□□ -1
HPS4-209ENST00000466781 SLC35G4P0C7Q5 338 aa8.79□□□□□ -1
HPS4-209ENST00000466781 PTPN1P18031 435 aaKnown RBP8.79□□□□□ -1
HPS4-209ENST00000466781 ACADLP28330 430 aa8.79□□□□□ -1
HPS4-209ENST00000466781 ELK3P41970 407 aa8.79□□□□□ -1
HPS4-209ENST00000466781 PSEN1P49768 467 aa8.79□□□□□ -1
HPS4-209ENST00000466781 INO80DQ53TQ3 878 aaPredicted RBP8.79□□□□□ -1
HPS4-209ENST00000466781 OTOP1Q7RTM1 612 aa8.79□□□□□ -1
HPS4-209ENST00000466781 RASAL3Q86YV0 1011 aa8.79□□□□□ -1
HPS4-209ENST00000466781 REXO1L1PQ8IX06 675 aa8.79□□□□□ -1
HPS4-209ENST00000466781 HELQQ8TDG4 1101 aa8.79□□□□□ -1
HPS4-209ENST00000466781 GAD1Q99259 594 aa8.79□□□□□ -1
HPS4-209ENST00000466781 SHPRHQ149N8 1683 aa8.79□□□□□ -1
HPS4-209ENST00000466781 SLC28A1O00337 649 aa8.78□□□□□ -1
HPS4-209ENST00000466781 KHDRBS3O75525 346 aaKnown RBP8.78□□□□□ -1
HPS4-209ENST00000466781 BCL10O95999 233 aa8.78□□□□□ -1
HPS4-209ENST00000466781 FGBP02675 491 aa8.78□□□□□ -1
HPS4-209ENST00000466781 CCNYL3P0C7X3 344 aa8.78□□□□□ -1
HPS4-209ENST00000466781 CDC42P60953 191 aa8.78□□□□□ -1
HPS4-209ENST00000466781 MSLNQ13421 630 aaPredicted RBP8.78□□□□□ -1
HPS4-209ENST00000466781 TAB1Q15750 504 aa8.78□□□□□ -1
HPS4-209ENST00000466781 ATP13A4Q4VNC1 1196 aa8.78□□□□□ -1
HPS4-209ENST00000466781 ZPBP2Q6X784 338 aa8.78□□□□□ -1
HPS4-209ENST00000466781 ZNF276Q8N554 614 aa8.78□□□□□ -1
HPS4-209ENST00000466781 NKAPQ8N5F7 415 aaKnown RBP8.78□□□□□ -1
HPS4-209ENST00000466781 TRPV3Q8NET8 790 aa8.78□□□□□ -1
HPS4-209ENST00000466781 ACTL9Q8TC94 416 aa8.78□□□□□ -1
HPS4-209ENST00000466781 UBASH3BQ8TF42 649 aa8.78□□□□□ -1
HPS4-209ENST00000466781 TRIM63Q969Q1 353 aa8.78□□□□□ -1
HPS4-209ENST00000466781 CCNA2P20248 432 aa8.78□□□□□ -1
HPS4-209ENST00000466781 PPM1AP35813 382 aa8.78□□□□□ -1
HPS4-209ENST00000466781 HSPA14Q0VDF9 509 aa8.78□□□□□ -1
HPS4-209ENST00000466781 ACAP1Q15027 740 aa8.78□□□□□ -1
HPS4-209ENST00000466781 DGUOKQ16854 277 aa8.78□□□□□ -1
HPS4-209ENST00000466781 RBM23Q86U06 439 aaKnown RBP8.78□□□□□ -1
HPS4-209ENST00000466781 ARHGEF19Q8IW93 802 aa8.78□□□□□ -1
HPS4-209ENST00000466781 MSL3Q8N5Y2 521 aaKnown RBP8.78□□□□□ -1
HPS4-209ENST00000466781 BRD9Q9H8M2 597 aa8.78□□□□□ -1
HPS4-209ENST00000466781 OSGEPQ9NPF4 335 aa8.78□□□□□ -1
HPS4-209ENST00000466781 THAP1Q9NVV9 213 aa8.78□□□□□ -1
HPS4-209ENST00000466781 NUDT5Q9UKK9 219 aa8.78□□□□□ -1
HPS4-209ENST00000466781 CDH9Q9ULB4 789 aa8.78□□□□□ -1
HPS4-209ENST00000466781 A0A0G2JLL6 359 aaPredicted RBP8.78□□□□□ -1
HPS4-209ENST00000466781 H3BNH8 94 aa8.78□□□□□ -1
HPS4-209ENST00000466781 PHGDHO43175 533 aaKnown RBP8.78□□□□□ -1
HPS4-209ENST00000466781 APODP05090 189 aa8.78□□□□□ -1
HPS4-209ENST00000466781 CYP2C18P33260 490 aa8.78□□□□□ -1
HPS4-209ENST00000466781 ITGADQ13349 1161 aa8.78□□□□□ -1
HPS4-209ENST00000466781 ITGA7Q13683 1181 aa8.78□□□□□ -1
HPS4-209ENST00000466781 FRG1Q14331 258 aaKnown RBP8.78□□□□□ -1
HPS4-209ENST00000466781 TCHHL1Q5QJ38 904 aaPredicted RBP8.78□□□□□ -1
HPS4-209ENST00000466781 PLPPR4Q7Z2D5 763 aa8.78□□□□□ -1
HPS4-209ENST00000466781 PRRT2Q7Z6L0 340 aaPredicted RBP8.78□□□□□ -1
HPS4-209ENST00000466781 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.78□□□□□ -1
HPS4-209ENST00000466781 SLC41A1Q8IVJ1 513 aa8.78□□□□□ -1
HPS4-209ENST00000466781 PPTC7Q8NI37 304 aa8.78□□□□□ -1
HPS4-209ENST00000466781 IPCEF1Q8WWN9 437 aaPredicted RBP8.78□□□□□ -1
HPS4-209ENST00000466781 ZNF606Q8WXB4 792 aa8.78□□□□□ -1
HPS4-209ENST00000466781 C9orf16Q9BUW7 83 aa8.78□□□□□ -1
HPS4-209ENST00000466781 COMMD9Q9P000 198 aa8.78□□□□□ -1
HPS4-209ENST00000466781 SLC12A4Q9UP95 1085 aa8.78□□□□□ -1
HPS4-209ENST00000466781 SCN2BO60939 215 aa8.78□□□□□ -1
HPS4-209ENST00000466781 CLPTM1O96005 669 aa8.78□□□□□ -1
HPS4-209ENST00000466781 MMP3P08254 477 aa8.78□□□□□ -1
HPS4-209ENST00000466781 NR2F1P10589 423 aa8.78□□□□□ -1
HPS4-209ENST00000466781 ABL2P42684 1182 aa8.78□□□□□ -1
HPS4-209ENST00000466781 PARP6Q2NL67 630 aa8.78□□□□□ -1
HPS4-209ENST00000466781 PLPP4Q5VZY2 271 aa8.78□□□□□ -1
HPS4-209ENST00000466781 TATDN1Q6P1N9 297 aa8.78□□□□□ -1
HPS4-209ENST00000466781 IZUMO2Q6UXV1 221 aa8.78□□□□□ -1
HPS4-209ENST00000466781 GET4Q7L5D6 327 aaPredicted RBP8.78□□□□□ -1
HPS4-209ENST00000466781 C18orf25Q96B23 403 aaPredicted RBP8.78□□□□□ -1
HPS4-209ENST00000466781 FRMD6Q96NE9 622 aa8.78□□□□□ -1
HPS4-209ENST00000466781 PDCD10Q9BUL8 212 aa8.78□□□□□ -1
HPS4-209ENST00000466781 CDADC1Q9BWV3 514 aa8.78□□□□□ -1
HPS4-209ENST00000466781 BPIFA1Q9NP55 256 aa8.78□□□□□ -1
HPS4-209ENST00000466781 RHBDL2Q9NX52 303 aa8.78□□□□□ -1
HPS4-209ENST00000466781 IQCMA0A1B0GVH7 501 aa8.78□□□□□ -1
HPS4-209ENST00000466781 SEPT4O43236 478 aa8.78□□□□□ -1
HPS4-209ENST00000466781 ASNA1O43681 348 aa8.78□□□□□ -1
HPS4-209ENST00000466781 PEX10O60683 326 aa8.78□□□□□ -1
HPS4-209ENST00000466781 ALOX12P18054 663 aa8.78□□□□□ -1
HPS4-209ENST00000466781 PTPN4P29074 926 aa8.78□□□□□ -1
HPS4-209ENST00000466781 HOXC12P31275 282 aa8.78□□□□□ -1
HPS4-209ENST00000466781 AKT2P31751 481 aa8.78□□□□□ -1
HPS4-209ENST00000466781 NOS2P35228 1153 aa8.78□□□□□ -1
HPS4-209ENST00000466781 CDK7P50613 346 aa8.78□□□□□ -1
HPS4-209ENST00000466781 PCID2Q5JVF3 399 aa8.78□□□□□ -1
HPS4-209ENST00000466781 LPCAT2Q7L5N7 544 aa8.78□□□□□ -1
HPS4-209ENST00000466781 ZNF571Q7Z3V5 609 aaPredicted RBP8.78□□□□□ -1
HPS4-209ENST00000466781 TTC7BQ86TV6 843 aa8.78□□□□□ -1
HPS4-209ENST00000466781 STK32CQ86UX6 486 aa8.78□□□□□ -1
HPS4-209ENST00000466781 ZNF563Q8TA94 476 aa8.78□□□□□ -1
HPS4-209ENST00000466781 TEKT5Q96M29 485 aa8.78□□□□□ -1
HPS4-209ENST00000466781 ZYG11BQ9C0D3 744 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms