RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 CDK5RAP1Q96SZ6 601 aaKnown RBP6.08□□□□□ -1.44
SSBP1-204ENST00000465167 BPIFA3Q9BQP9 254 aa6.08□□□□□ -1.44
SSBP1-204ENST00000465167 LSM14BQ9BX40 385 aaKnown RBP6.08□□□□□ -1.44
SSBP1-204ENST00000465167 B3GNT5Q9BYG0 378 aa6.08□□□□□ -1.44
SSBP1-204ENST00000465167 SMOC1Q9H4F8 434 aa6.08□□□□□ -1.44
SSBP1-204ENST00000465167 CXorf56Q9H5V9 222 aa6.08□□□□□ -1.44
SSBP1-204ENST00000465167 METTL14Q9HCE5 456 aaKnown RBP6.08□□□□□ -1.44
SSBP1-204ENST00000465167 FBRSL1Q9HCM7 1045 aaKnown RBP6.08□□□□□ -1.44
SSBP1-204ENST00000465167 DNAJC17Q9NVM6 304 aaKnown RBP6.08□□□□□ -1.44
SSBP1-204ENST00000465167 WDR35Q9P2L0 1181 aa6.08□□□□□ -1.44
SSBP1-204ENST00000465167 GVINP1Q7Z2Y8 2422 aa6.08□□□□□ -1.44
SSBP1-204ENST00000465167 CEP192Q8TEP8 1941 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 LNP1A1A4G5 178 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 LRRIQ3A6PVS8 624 aaPredicted RBP6.07□□□□□ -1.44
SSBP1-204ENST00000465167 NEDD8-MDP1E9PL57 170 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 K7EQS6 105 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 POLR3GO15318 223 aaPredicted RBP6.07□□□□□ -1.44
SSBP1-204ENST00000465167 HOXC11O43248 304 aaPredicted RBP6.07□□□□□ -1.44
SSBP1-204ENST00000465167 HYAL3O43820 417 aaPredicted RBP6.07□□□□□ -1.44
SSBP1-204ENST00000465167 STX10O60499 249 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 TLR5O60602 858 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 ZNF217O75362 1048 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 KCNK5O95279 499 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 OLFM2O95897 454 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 NR3C1P04150 777 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 CYBBP04839 570 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 CCDC130P13994 396 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 HOXB2P14652 356 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 GNSP15586 552 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 ADORA2BP29275 332 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 HOXD12P35452 270 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 ATP5C1P36542 298 aaKnown RBP6.07□□□□□ -1.44
SSBP1-204ENST00000465167 SLC6A11P48066 632 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 VAMP7P51809 220 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 NDST1P52848 882 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 CDH8P55286 799 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 MAP3K7CLP57077 242 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 SHC2P98077 582 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 CUL4BQ13620 913 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 LRP8Q14114 963 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 STARD3Q14849 445 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 DUOXA1Q1HG43 343 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 ERCC6LQ2NKX8 1250 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 SPDYCQ5MJ68 293 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 C10orf120Q5SQS8 335 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 SYCP2LQ5T4T6 812 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 RESP18Q5W5W9 173 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 STEAP3Q658P3 488 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 TCEAL6Q6IPX3 200 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 SHC4Q6S5L8 630 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 TPGS1Q6ZTW0 290 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 INTS8Q75QN2 995 aaKnown RBP6.07□□□□□ -1.44
SSBP1-204ENST00000465167 RSRC2Q7L4I2 434 aaKnown RBP6.07□□□□□ -1.44
SSBP1-204ENST00000465167 RASSF3Q86WH2 238 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 SYT12Q8IV01 421 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 CHPFQ8IZ52 775 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 ADGRG2Q8IZP9 1017 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 ARHGAP18Q8N392 663 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 TTC39CQ8N584 583 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 CEP112Q8N8E3 955 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 TERB1Q8NA31 727 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 IL17RCQ8NAC3 791 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 NETO2Q8NC67 525 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 SCAMP5Q8TAC9 235 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 CEP76Q8TAP6 659 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 PARD3BQ8TEW8 1205 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 TCEAL3Q969E4 200 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 JAKMIP2Q96AA8 810 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 BOCQ9BWV1 1114 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 BBS2Q9BXC9 721 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 RNF38Q9H0F5 515 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 MMRN2Q9H8L6 949 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 EMC7Q9NPA0 242 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 SPHK2Q9NRA0 654 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 FAM49BQ9NUQ9 324 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 POLR3BQ9NW08 1133 aaPredicted RBP6.07□□□□□ -1.44
SSBP1-204ENST00000465167 OXSMQ9NWU1 459 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 CHORDC1Q9UHD1 332 aaPredicted RBP6.07□□□□□ -1.44
SSBP1-204ENST00000465167 EVLQ9UI08 416 aaPredicted RBP6.07□□□□□ -1.44
SSBP1-204ENST00000465167 PCDHA7Q9UN72 937 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 ZNF510Q9Y2H8 683 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 PCDHA5Q9Y5H7 936 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 USP34Q70CQ2 3546 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 PLXND1Q9Y4D7 1925 aa6.07□□□□□ -1.44
SSBP1-204ENST00000465167 MYOFQ9NZM1 2061 aa6.06□□□□□ -1.44
SSBP1-204ENST00000465167 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.06□□□□□ -1.44
SSBP1-204ENST00000465167 TMEM8BA6NDV4 472 aa6.06□□□□□ -1.44
SSBP1-204ENST00000465167 EIF3CLB5ME19 914 aaKnown RBP6.06□□□□□ -1.44
SSBP1-204ENST00000465167 SGK1O00141 431 aa6.06□□□□□ -1.44
SSBP1-204ENST00000465167 PDXKO00764 312 aa6.06□□□□□ -1.44
SSBP1-204ENST00000465167 KCNK3O14649 394 aa6.06□□□□□ -1.44
SSBP1-204ENST00000465167 IKBKBO14920 756 aa6.06□□□□□ -1.44
SSBP1-204ENST00000465167 HGSO14964 777 aaPredicted RBP6.06□□□□□ -1.44
SSBP1-204ENST00000465167 SYNCRIPO60506 623 aaKnown RBP6.06□□□□□ -1.44
SSBP1-204ENST00000465167 OPHN1O60890 802 aa6.06□□□□□ -1.44
SSBP1-204ENST00000465167 TULP3O75386 442 aa6.06□□□□□ -1.44
SSBP1-204ENST00000465167 KATNA1O75449 491 aa6.06□□□□□ -1.44
SSBP1-204ENST00000465167 CEACAM1P13688 526 aa6.06□□□□□ -1.44
SSBP1-204ENST00000465167 ACO1P21399 889 aaKnown RBP6.06□□□□□ -1.44
SSBP1-204ENST00000465167 BCKDHBP21953 392 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms