RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 C15orf59Q2T9L4 293 aaPredicted RBP12.04□□□□□ -0.48
LTBR-203ENST00000441074 AARS2Q5JTZ9 985 aaKnown RBP12.04□□□□□ -0.48
LTBR-203ENST00000441074 TMEM198Q66K66 360 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 IQSEC1Q6DN90 963 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 TRNP1Q6NT89 227 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 CHSY3Q70JA7 882 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 CLEC14AQ86T13 490 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 CPNE9Q8IYJ1 553 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 ZNF786Q8N393 782 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 PACRGLQ8N7B6 248 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 MFSD2AQ8NA29 543 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 C17orf50Q8WW18 174 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 TRUB1Q8WWH5 349 aaKnown RBP12.04□□□□□ -0.48
LTBR-203ENST00000441074 EMID1Q96A84 441 aaPredicted RBP12.04□□□□□ -0.48
LTBR-203ENST00000441074 PPP1R36Q96LQ0 422 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 ZNF670Q9BS34 389 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 EIF2AQ9BY44 585 aaKnown RBP12.04□□□□□ -0.48
LTBR-203ENST00000441074 ARMC7Q9H6L4 198 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 NOL11Q9H8H0 719 aaKnown RBP12.04□□□□□ -0.48
LTBR-203ENST00000441074 PTPRHQ9HD43 1115 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 GID8Q9NWU2 228 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 MID2Q9UJV3 735 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 PCDHGA7Q9Y5G6 932 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 GPC6Q9Y625 555 aaPredicted RBP12.04□□□□□ -0.48
LTBR-203ENST00000441074 SLC30A1Q9Y6M5 507 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 ACKR2O00590 384 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 SNAP91O60641 907 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 GSTT2P0CG29 244 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 GSTT2BP0CG30 244 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 HSPA8P11142 646 aaKnown RBP12.03□□□□□ -0.48
LTBR-203ENST00000441074 SPRP35270 261 aaPredicted RBP12.03□□□□□ -0.48
LTBR-203ENST00000441074 FCGRTP55899 365 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 RPS3AP61247 264 aaKnown RBP12.03□□□□□ -0.48
LTBR-203ENST00000441074 PRAMEP78395 509 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 PRKCQQ04759 706 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 PRKAA1Q13131 559 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 PMS2P3Q13401 168 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 ATP1A4Q13733 1029 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 GPR107Q5VW38 600 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 ANKRD26P1Q6NSI1 321 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 PTAR1Q7Z6K3 402 aaPredicted RBP12.03□□□□□ -0.48
LTBR-203ENST00000441074 TRPV1Q8NER1 839 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 LPGAT1Q92604 370 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 HEPHQ9BQS7 1158 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 ELOVL4Q9GZR5 314 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 PCDHAC1Q9H158 963 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 UNC93B1Q9H1C4 597 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 FZD8Q9H461 694 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 GPATCH2LQ9NWQ4 482 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 HACD3Q9P035 362 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 TMEM9Q9P0T7 183 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 KIAA1257Q9ULG3 409 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 COPG1Q9Y678 874 aaKnown RBP12.03□□□□□ -0.48
LTBR-203ENST00000441074 PLXNB2O15031 1838 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 ANK1P16157 1881 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 CASP8AP2Q9UKL3 1982 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 TRIM24O15164 1050 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 PGK1P00558 417 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 LTFP02788 710 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 MYL3P08590 195 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 CD247P20963 164 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 MGAT1P26572 445 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 RPL10P27635 214 aaKnown RBP12.03□□□□□ -0.48
LTBR-203ENST00000441074 PRKAA2P54646 552 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 NME5P56597 212 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 GALNT2Q10471 571 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 RGS21Q2M5E4 152 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 FGD3Q5JSP0 725 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 EGFLAMQ63HQ2 1017 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 NXNQ6DKJ4 435 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 COLGALT2Q8IYK4 626 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 RNF169Q8NCN4 708 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 TANKQ92844 425 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 PBXIP1Q96AQ6 731 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 SNX27Q96L92 541 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 QKIQ96PU8 341 aaKnown RBP eCLIP12.03□□□□□ -0.48
LTBR-203ENST00000441074 RBBP8Q99708 897 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 NMRAL1Q9HBL8 299 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 SIX4Q9UIU6 781 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 CNOT6Q9ULM6 557 aaKnown RBP12.03□□□□□ -0.48
LTBR-203ENST00000441074 ERGIC3Q9Y282 383 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 HES2Q9Y543 173 aa12.03□□□□□ -0.48
LTBR-203ENST00000441074 ZSWIM8A7E2V4 1837 aa12.02□□□□□ -0.48
LTBR-203ENST00000441074 A0A096LPK6 155 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 HEATR9A2RTY3 570 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 E7ENX8 843 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 GOLGA8TH3BQL2 631 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 SOCS2O14508 198 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 MDM4O15151 490 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 PIGNO95427 931 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 APOA4P06727 396 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 SMIM10L2AP0DMW4 78 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 SMIM10L2BP0DMW5 78 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 ERVK-10P10266 1014 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 CKMT2P17540 419 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 ARF4P18085 180 aaPredicted RBP12.02□□□□□ -0.49
LTBR-203ENST00000441074 EIF2B2P49770 351 aaKnown RBP12.02□□□□□ -0.49
LTBR-203ENST00000441074 SESN2P58004 480 aaPredicted RBP12.02□□□□□ -0.49
LTBR-203ENST00000441074 GRSF1Q12849 480 aaKnown RBP eCLIP12.02□□□□□ -0.49
LTBR-203ENST00000441074 BNIP3Q12983 259 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms