RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 ZNF212Q9UDV6 495 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 PCDHGA4Q9Y5G9 962 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 C16orf96A6NNT2 1141 aa17■□□□□ 0.31
CHCHD3-202ENST00000423635 PPFIA2O75334 1257 aa17■□□□□ 0.31
CHCHD3-202ENST00000423635 DAB1O75553 588 aa17■□□□□ 0.31
CHCHD3-202ENST00000423635 HGFP14210 728 aa17■□□□□ 0.31
CHCHD3-202ENST00000423635 CCL7P80098 99 aa17■□□□□ 0.31
CHCHD3-202ENST00000423635 ARF5P84085 180 aa17■□□□□ 0.31
CHCHD3-202ENST00000423635 PPARDQ03181 441 aa17■□□□□ 0.31
CHCHD3-202ENST00000423635 MANEAQ5SRI9 462 aa17■□□□□ 0.31
CHCHD3-202ENST00000423635 LRRC31Q6UY01 552 aa17■□□□□ 0.31
CHCHD3-202ENST00000423635 MACC1Q6ZN28 852 aa17■□□□□ 0.31
CHCHD3-202ENST00000423635 FAM183BPQ6ZVS7 135 aa17■□□□□ 0.31
CHCHD3-202ENST00000423635 SLC26A9Q7LBE3 791 aa17■□□□□ 0.31
CHCHD3-202ENST00000423635 DTX1Q86Y01 620 aa17■□□□□ 0.31
CHCHD3-202ENST00000423635 FSTL5Q8N475 847 aaPredicted RBP17■□□□□ 0.31
CHCHD3-202ENST00000423635 ZNF397Q8NF99 534 aaPredicted RBP17■□□□□ 0.31
CHCHD3-202ENST00000423635 SCG3Q8WXD2 468 aaKnown RBP17■□□□□ 0.31
CHCHD3-202ENST00000423635 NT5C3BQ969T7 300 aa17■□□□□ 0.31
CHCHD3-202ENST00000423635 CCDC74AQ96AQ1 378 aa17■□□□□ 0.31
CHCHD3-202ENST00000423635 VOPP1Q96AW1 172 aa17■□□□□ 0.31
CHCHD3-202ENST00000423635 ISG20Q96AZ6 181 aaKnown RBP17■□□□□ 0.31
CHCHD3-202ENST00000423635 TMEM159Q96B96 161 aa17■□□□□ 0.31
CHCHD3-202ENST00000423635 PGAP3Q96FM1 320 aaPredicted RBP17■□□□□ 0.31
CHCHD3-202ENST00000423635 DHTKD1Q96HY7 919 aaPredicted RBP17■□□□□ 0.31
CHCHD3-202ENST00000423635 MPP6Q9NZW5 540 aa17■□□□□ 0.31
CHCHD3-202ENST00000423635 HECAQ9UBI9 543 aaPredicted RBP17■□□□□ 0.31
CHCHD3-202ENST00000423635 GULP1Q9UBP9 304 aa17■□□□□ 0.31
CHCHD3-202ENST00000423635 SEPT3Q9UH03 358 aa17■□□□□ 0.31
CHCHD3-202ENST00000423635 GGT7Q9UJ14 662 aa17■□□□□ 0.31
CHCHD3-202ENST00000423635 CD160O95971 181 aa16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 JMJD7P0C870 316 aa16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 IGFALSP35858 605 aa16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 EIF4A3P38919 411 aaKnown RBP16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 BLKP51451 505 aa16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 DNA2P51530 1060 aa16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 SLC6A3Q01959 620 aa16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 TLE1Q04724 770 aa16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 ZFP36L1Q07352 338 aaKnown RBP16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 UBAP2LQ14157 1087 aaKnown RBP16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 ELOCQ15369 112 aa16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 ZNF805Q5CZA5 627 aa16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 ENOSF1Q7L5Y1 443 aa16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 TFAP2DQ7Z6R9 452 aa16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 ZSCAN1Q8NBB4 408 aa16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 OR6C4Q8NGE1 309 aa16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 ARHGEF26Q96DR7 871 aa16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 SPON2Q9BUD6 331 aa16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 FOXP3Q9BZS1 431 aa16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 SCAND2PQ9GZW5 306 aaPredicted RBP16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 INTS2Q9H0H0 1204 aaKnown RBP16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 LRRN3Q9H3W5 708 aa16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 TMEM51Q9NW97 253 aa16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 PCDHGC3Q9UN70 934 aa16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 SNX10Q9Y5X0 201 aa16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 RELNP78509 3460 aa16.99■□□□□ 0.31
CHCHD3-202ENST00000423635 NEMP1O14524 444 aa16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 PSMA7O14818 248 aa16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 AREL1O15033 823 aa16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 F9P00740 461 aa16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 RPLP0P05388 317 aaKnown RBP16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 CELA2BP08218 269 aaPredicted RBP16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 ALPIP09923 528 aa16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 PEX5P50542 639 aa16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 MORC3Q14149 939 aa16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 TRIM59Q8IWR1 403 aa16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 CPEB1Q9BZB8 566 aaKnown RBP16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 EDEM3Q9BZQ6 932 aa16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 B3GNT4Q9C0J1 378 aa16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 ZDHHC6Q9H6R6 413 aa16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 ATP13A1Q9HD20 1204 aa16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 PISDQ9UG56 409 aa16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 DOLKQ9UPQ8 538 aa16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 ITM2BQ9Y287 266 aa16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 FCF1Q9Y324 198 aaKnown RBP16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 ZDHHC9Q9Y397 364 aa16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 LOXL2Q9Y4K0 774 aa16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 SCN8AQ9UQD0 1980 aa16.98■□□□□ 0.31
CHCHD3-202ENST00000423635 A0A1W2PQC6 194 aa16.97■□□□□ 0.31
CHCHD3-202ENST00000423635 BECN2A8MW95 431 aa16.97■□□□□ 0.31
CHCHD3-202ENST00000423635 ERBB2P04626 1255 aa16.97■□□□□ 0.31
CHCHD3-202ENST00000423635 GP1BBP13224 206 aa16.97■□□□□ 0.31
CHCHD3-202ENST00000423635 TFE3P19532 575 aaPredicted RBP16.97■□□□□ 0.31
CHCHD3-202ENST00000423635 WT1P19544 449 aaPredicted RBP16.97■□□□□ 0.31
CHCHD3-202ENST00000423635 HK3P52790 923 aa16.97■□□□□ 0.31
CHCHD3-202ENST00000423635 SNX16P57768 344 aa16.97■□□□□ 0.31
CHCHD3-202ENST00000423635 CLCA4Q14CN2 919 aa16.97■□□□□ 0.31
CHCHD3-202ENST00000423635 FOXR2Q6PJQ5 311 aa16.97■□□□□ 0.31
CHCHD3-202ENST00000423635 VPS36Q86VN1 386 aa16.97■□□□□ 0.31
CHCHD3-202ENST00000423635 FMR1NBQ8N0W7 255 aaPredicted RBP16.97■□□□□ 0.31
CHCHD3-202ENST00000423635 KYQ8NBH2 561 aa16.97■□□□□ 0.31
CHCHD3-202ENST00000423635 TP53I13Q8NBR0 393 aaPredicted RBP16.97■□□□□ 0.31
CHCHD3-202ENST00000423635 PCDH19Q8TAB3 1148 aa16.97■□□□□ 0.31
CHCHD3-202ENST00000423635 HTR3CQ8WXA8 447 aa16.97■□□□□ 0.31
CHCHD3-202ENST00000423635 FUCA2Q9BTY2 467 aa16.97■□□□□ 0.31
CHCHD3-202ENST00000423635 ADNPQ9H2P0 1102 aa16.97■□□□□ 0.31
CHCHD3-202ENST00000423635 MBNL1Q9NR56 388 aaKnown RBP16.97■□□□□ 0.31
CHCHD3-202ENST00000423635 APPL1Q9UKG1 709 aa16.97■□□□□ 0.31
CHCHD3-202ENST00000423635 PAXBP1Q9Y5B6 917 aa16.97■□□□□ 0.31
CHCHD3-202ENST00000423635 PCDHB11Q9Y5F2 797 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms