RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 CETN2P41208 172 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 PNPLA4P41247 253 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 SLC6A11P48066 632 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 SMCPP49901 116 aaPredicted RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 SCNN1GP51170 649 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 CLCNKAP51800 687 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 PER3P56645 1201 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 WNT3AP56704 352 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 UBE2IP63279 158 aaKnown RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 NKX3-2P78367 333 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 DR1Q01658 176 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 SLC6A3Q01959 620 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 MEF2AQ02078 507 aaPredicted RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 GAD2Q05329 585 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 SRSF11Q05519 484 aaKnown RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 PDZK1IP1Q13113 114 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 TARDBPQ13148 414 aaKnown RBP eCLIP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 ATP1A4Q13733 1029 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 IL18Q14116 193 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 ARHGEF7Q14155 803 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 CSHL1Q14406 222 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 IL11RAQ14626 422 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 VEPH1Q14D04 833 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 NCF4Q15080 339 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 KCNA10Q16322 511 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 GSTA3Q16772 222 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 SKIDA1Q1XH10 827 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 Q3ZCU0 254 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 NADK2Q4G0N4 442 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 CYP27C1Q4G0S4 372 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 LRRC24Q50LG9 513 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 LIN9Q5TKA1 542 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 DCAF12L1Q5VU92 463 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 ARHGEF16Q5VV41 709 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 BTBD8Q5XKL5 378 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 AFMIDQ63HM1 303 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 PLAG1Q6DJT9 500 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 GDF6Q6KF10 455 aaPredicted RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 CRTC3Q6UUV7 619 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 TMC5Q6UXY8 1006 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 KCTD1Q719H9 257 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 TRAPPC11Q7Z392 1133 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 TMC3Q7Z5M5 1100 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 MRPL10Q7Z7H8 261 aaKnown RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 STK32CQ86UX6 486 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 EXOC3L1Q86VI1 746 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 SGMS1Q86VZ5 419 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 LDHDQ86WU2 507 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 SLC22A9Q8IVM8 553 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 C12orf56Q8IXR9 622 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 SP8Q8IXZ3 490 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 C4orf19Q8IY42 314 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 PM20D2Q8IYS1 436 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 SLC43A2Q8N370 569 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 ZNF655Q8N720 491 aaPredicted RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 ENDOVQ8N8Q3 282 aaKnown RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 ARRDC4Q8NCT1 418 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 SETD9Q8NE22 299 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 SHCBP1Q8NEM2 672 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 STEAP2Q8NFT2 490 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 NLGN2Q8NFZ4 835 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 OR52J3Q8NH60 311 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 GIMAP7Q8NHV1 300 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 WDR48Q8TAF3 677 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 ERMNQ8TAM6 284 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 GRAPLQ8TC17 118 aaPredicted RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 SYN2Q92777 582 aaPredicted RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 BCL2L2Q92843 193 aaPredicted RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 RASD2Q96D21 266 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 MRPL38Q96DV4 380 aaKnown RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 CCDC51Q96ER9 411 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 ZDHHC12Q96GR4 267 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 ABHD17AQ96GS6 310 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 FBXL20Q96IG2 436 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 COX4I2Q96KJ9 171 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 HIST1H2AHQ96KK5 128 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 MRGPRX2Q96LB1 330 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 COQ10AQ96MF6 247 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 INTS14Q96SY0 518 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 GAD1Q99259 594 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 NEU1Q99519 415 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 SLC30A3Q99726 388 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 HIST1H2AJQ99878 128 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 NUDT22Q9BRQ3 303 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 ZSCAN5AQ9BUG6 496 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 C1orf43Q9BWL3 253 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 KLF16Q9BXK1 252 aaPredicted RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 TLR10Q9BXR5 811 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 MOV10L1Q9BXT6 1211 aaKnown RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 CPEB1Q9BZB8 566 aaKnown RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 GPR61Q9BZJ8 451 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 RAB33BQ9H082 229 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 EPC1Q9H2F5 836 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 SERHL2Q9H4I8 314 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 ECT2Q9H8V3 914 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 PLEKHA2Q9HB19 425 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 PIDD1Q9HB75 910 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 GPN1Q9HCN4 374 aaPredicted RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 PIH1D3Q9NQM4 214 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms