RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 NTAN1Q96AB6 310 aa16.75■□□□□ 0.27
SCAMP4-203ENST00000411971 FEM1CQ96JP0 617 aa16.75■□□□□ 0.27
SCAMP4-203ENST00000411971 MAGEH1Q9H213 219 aa16.75■□□□□ 0.27
SCAMP4-203ENST00000411971 MBNL1Q9NR56 388 aaKnown RBP16.75■□□□□ 0.27
SCAMP4-203ENST00000411971 TAS2R14Q9NYV8 317 aa16.75■□□□□ 0.27
SCAMP4-203ENST00000411971 LIMA1Q9UHB6 759 aaKnown RBP16.75■□□□□ 0.27
SCAMP4-203ENST00000411971 GCN1Q92616 2671 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-203ENST00000411971 SIGLEC16A6NMB1 481 aa16.74■□□□□ 0.27
SCAMP4-203ENST00000411971 LGALS16A8MUM7 142 aa16.74■□□□□ 0.27
SCAMP4-203ENST00000411971 SCAMP1O15126 338 aa16.74■□□□□ 0.27
SCAMP4-203ENST00000411971 KALRNO60229 2985 aa16.74■□□□□ 0.27
SCAMP4-203ENST00000411971 OPA1O60313 960 aa16.74■□□□□ 0.27
SCAMP4-203ENST00000411971 RAMP2O60895 175 aa16.74■□□□□ 0.27
SCAMP4-203ENST00000411971 GSRP00390 522 aa16.74■□□□□ 0.27
SCAMP4-203ENST00000411971 CSF2P04141 144 aa16.74■□□□□ 0.27
SCAMP4-203ENST00000411971 NME1P15531 152 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-203ENST00000411971 PFN3P60673 137 aa16.74■□□□□ 0.27
SCAMP4-203ENST00000411971 POLD3Q15054 466 aaPredicted RBP16.74■□□□□ 0.27
SCAMP4-203ENST00000411971 ARL13BQ3SXY8 428 aa16.74■□□□□ 0.27
SCAMP4-203ENST00000411971 C3orf20Q8ND61 904 aa16.74■□□□□ 0.27
SCAMP4-203ENST00000411971 FUBP1Q96AE4 644 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-203ENST00000411971 CENPTQ96BT3 561 aa16.74■□□□□ 0.27
SCAMP4-203ENST00000411971 HMCESQ96FZ2 354 aa16.74■□□□□ 0.27
SCAMP4-203ENST00000411971 SYT11Q9BT88 431 aa16.74■□□□□ 0.27
SCAMP4-203ENST00000411971 GPATCH2LQ9NWQ4 482 aa16.74■□□□□ 0.27
SCAMP4-203ENST00000411971 NLGN3Q9NZ94 848 aa16.74■□□□□ 0.27
SCAMP4-203ENST00000411971 LHX3Q9UBR4 397 aa16.74■□□□□ 0.27
SCAMP4-203ENST00000411971 PMS2P1A4D2B8 440 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 MMP20O60882 483 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 GCATO75600 419 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 PRB1P04280 392 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 CELA2BP08218 269 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 ATP1A3P13637 1013 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 TIMP2P16035 220 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 ABCG1P45844 678 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 CCDC15Q0P6D6 951 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 PDE1CQ14123 709 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 CYTH1Q15438 398 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 KCTD16Q68DU8 428 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 GUSBP11Q6P575 273 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 TRIM72Q6ZMU5 477 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 SLFN11Q7Z7L1 901 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 CACTIN-AS1Q8N1I8 211 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 RTL3Q8N8U3 475 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 SNIP1Q8TAD8 396 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 IFT43Q96FT9 208 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 EXOC2Q96KP1 924 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 MCEEQ96PE7 176 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 LENG8Q96PV6 779 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 AGPAT1Q99943 283 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 SELENOOQ9BVL4 669 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 PRORYQ9H606 182 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 TMEM51Q9NW97 253 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 FZD10Q9ULW2 581 aa16.73■□□□□ 0.27
SCAMP4-203ENST00000411971 CXorf51AA0A1B0GTR3 108 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 RASA4BC9J798 803 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 RASA4O43374 803 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 TSPAN6O43657 245 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 BUB1O43683 1085 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 PIGNO95427 931 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 TGM2P21980 687 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 EPHB2P29323 1055 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 NSFP46459 744 aaKnown RBP16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 HNRNPKP61978 463 aaKnown RBP eCLIP16.72■□□□□ 0.271e-9■□□□□ 10.2
SCAMP4-203ENST00000411971 C1orf61Q13536 156 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 CA9Q16790 459 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 DEFB133Q30KQ1 61 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 FKBP15Q5T1M5 1219 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 SCYL2Q6P3W7 929 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 CRTC1Q6UUV9 634 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 GDPD4Q6W3E5 623 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 VPS36Q86VN1 386 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 PARGQ86W56 976 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 ZSWIM9Q86XI8 627 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 ARFGAP1Q8N6T3 406 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 FAM181AQ8N9Y4 354 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 TP53I13Q8NBR0 393 aaPredicted RBP16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 NSMCE3Q96MG7 304 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 ERGIC2Q96RQ1 377 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 CLPBQ9H078 707 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 COQ6Q9Y2Z9 468 aa16.72■□□□□ 0.27
SCAMP4-203ENST00000411971 LRRC10BA6NIK2 292 aa16.71■□□□□ 0.27
SCAMP4-203ENST00000411971 TEX33O43247 280 aa16.71■□□□□ 0.27
SCAMP4-203ENST00000411971 ATMINO43313 823 aaPredicted RBP16.71■□□□□ 0.27
SCAMP4-203ENST00000411971 CREB3O43889 395 aa16.71■□□□□ 0.27
SCAMP4-203ENST00000411971 POP4O95707 220 aaKnown RBP16.71■□□□□ 0.27
SCAMP4-203ENST00000411971 MPOP05164 745 aa16.71■□□□□ 0.27
SCAMP4-203ENST00000411971 JUNDP17535 347 aa16.71■□□□□ 0.27
SCAMP4-203ENST00000411971 ETFBP38117 255 aa16.71■□□□□ 0.27
SCAMP4-203ENST00000411971 RABIFP47224 123 aa16.71■□□□□ 0.27
SCAMP4-203ENST00000411971 RGRP47804 291 aa16.71■□□□□ 0.27
SCAMP4-203ENST00000411971 ZNF143P52747 638 aaPredicted RBP16.71■□□□□ 0.27
SCAMP4-203ENST00000411971 SNRPD1P62314 119 aaKnown RBP16.71■□□□□ 0.27
SCAMP4-203ENST00000411971 UBXN1Q04323 297 aa16.71■□□□□ 0.27
SCAMP4-203ENST00000411971 ACAP1Q15027 740 aa16.71■□□□□ 0.27
SCAMP4-203ENST00000411971 CDKN3Q16667 212 aa16.71■□□□□ 0.27
SCAMP4-203ENST00000411971 PERM1Q5SV97 790 aa16.71■□□□□ 0.27
SCAMP4-203ENST00000411971 E4F1Q66K89 784 aaPredicted RBP16.71■□□□□ 0.27
SCAMP4-203ENST00000411971 IRF2BP2Q7Z5L9 587 aa16.71■□□□□ 0.27
SCAMP4-203ENST00000411971 MCOLN2Q8IZK6 566 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms