RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 SFTPA1Q8IWL2 248 aa13.19□□□□□ -0.3
LIMS2-203ENST00000409254 PGBD5Q8N414 524 aa13.19□□□□□ -0.3
LIMS2-203ENST00000409254 OR2T3Q8NH03 318 aa13.19□□□□□ -0.3
LIMS2-203ENST00000409254 RPLP0P6Q8NHW5 317 aa13.19□□□□□ -0.3
LIMS2-203ENST00000409254 SORCS1Q8WY21 1168 aa13.19□□□□□ -0.3
LIMS2-203ENST00000409254 PPP1R16AQ96I34 528 aa13.19□□□□□ -0.3
LIMS2-203ENST00000409254 AGAP3Q96P47 875 aa13.19□□□□□ -0.3
LIMS2-203ENST00000409254 NECAB3Q96P71 396 aaPredicted RBP13.19□□□□□ -0.3
LIMS2-203ENST00000409254 SRPK1Q96SB4 655 aaKnown RBP13.19□□□□□ -0.3
LIMS2-203ENST00000409254 KRT12Q99456 494 aa13.19□□□□□ -0.3
LIMS2-203ENST00000409254 HEPHQ9BQS7 1158 aa13.19□□□□□ -0.3
LIMS2-203ENST00000409254 CARD6Q9BX69 1037 aa13.19□□□□□ -0.3
LIMS2-203ENST00000409254 PHACTR1Q9C0D0 580 aa13.19□□□□□ -0.3
LIMS2-203ENST00000409254 RSPH9Q9H1X1 276 aaPredicted RBP13.19□□□□□ -0.3
LIMS2-203ENST00000409254 MFSD1Q9H3U5 465 aa13.19□□□□□ -0.3
LIMS2-203ENST00000409254 CD248Q9HCU0 757 aa13.19□□□□□ -0.3
LIMS2-203ENST00000409254 SCUBE2Q9NQ36 999 aa13.19□□□□□ -0.3
LIMS2-203ENST00000409254 DKK3Q9UBP4 350 aa13.19□□□□□ -0.3
LIMS2-203ENST00000409254 FAM153AQ9UHL3 310 aa13.19□□□□□ -0.3
LIMS2-203ENST00000409254 UTP11Q9Y3A2 253 aaKnown RBP13.19□□□□□ -0.3
LIMS2-203ENST00000409254 SIT1Q9Y3P8 196 aa13.19□□□□□ -0.3
LIMS2-203ENST00000409254 PLXNA2O75051 1894 aa13.19□□□□□ -0.3
LIMS2-203ENST00000409254 TTC34A8MYJ7 566 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 K7ERQ8 282 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 MUSKO15146 869 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 ZBTB24O43167 697 aaPredicted RBP13.18□□□□□ -0.3
LIMS2-203ENST00000409254 ADAM23O75077 832 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 SUN1O94901 812 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 SLU7O95391 586 aaKnown RBP13.18□□□□□ -0.3
LIMS2-203ENST00000409254 KLF8O95600 359 aaPredicted RBP13.18□□□□□ -0.3
LIMS2-203ENST00000409254 AP2A1O95782 977 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 KRT14P02533 472 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 AOC1P19801 751 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 NFKB1P19838 968 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 HOXA6P31267 233 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 TNNT3P45378 269 aaPredicted RBP13.18□□□□□ -0.3
LIMS2-203ENST00000409254 CBLBQ13191 982 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 MYLK3Q32MK0 819 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 NAPEPLDQ6IQ20 393 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 NCEH1Q6PIU2 408 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 DPY19L3Q6ZPD9 716 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 LINC00523Q86TU6 105 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 KLHL7Q8IXQ5 586 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 CCDC33Q8N5R6 958 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 EIF1ADQ8N9N8 165 aaKnown RBP13.18□□□□□ -0.3
LIMS2-203ENST00000409254 TXNDC5Q8NBS9 432 aaKnown RBP13.18□□□□□ -0.3
LIMS2-203ENST00000409254 NETO2Q8NC67 525 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 ARRDC2Q8TBH0 407 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 CCDC110Q8TBZ0 833 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 FAM131CQ96AQ9 280 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 ECHDC3Q96DC8 303 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 FEM1CQ96JP0 617 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 SEMA3CQ99985 751 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 C19orf43Q9BQ61 176 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 ERP44Q9BS26 406 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 TM6SF2Q9BZW4 377 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 LRRC40Q9H9A6 602 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 LMAN1LQ9HAT1 526 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 POLMQ9NP87 494 aaPredicted RBP13.18□□□□□ -0.3
LIMS2-203ENST00000409254 PRSS16Q9NQE7 514 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 CACNA2D2Q9NY47 1150 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 IL36AQ9UHA7 158 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 SHOC2Q9UQ13 582 aa13.18□□□□□ -0.3
LIMS2-203ENST00000409254 CCDC163A0A0D9SF12 145 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 A0A1W2PQF6 199 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 TMEM221A6NGB7 291 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 BHMG1C9JSJ3 638 aaPredicted RBP13.17□□□□□ -0.3
LIMS2-203ENST00000409254 M0R296 226 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 TTI1O43156 1089 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 RAD51CO43502 376 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 SIN3BO75182 1162 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 MMP2P08253 660 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 HLA-DPA1P20036 260 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 CD72P21854 359 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 ITGB7P26010 798 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 PSMB4P28070 264 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 RPL22P35268 128 aaKnown RBP13.17□□□□□ -0.3
LIMS2-203ENST00000409254 CCR3P51677 355 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 POLR2LP62875 67 aaKnown RBP13.17□□□□□ -0.3
LIMS2-203ENST00000409254 SARNPP82979 210 aaKnown RBP13.17□□□□□ -0.3
LIMS2-203ENST00000409254 CAV1Q03135 178 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 BCL2L1Q07817 233 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 NUMA1Q14980 2115 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 MORF4L2Q15014 288 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 CRY1Q16526 586 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 C2orf27AQ580R0 203 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 ZNF776Q68DI1 518 aaPredicted RBP13.17□□□□□ -0.3
LIMS2-203ENST00000409254 KCTD11Q693B1 232 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 CWF19L1Q69YN2 538 aaKnown RBP13.17□□□□□ -0.3
LIMS2-203ENST00000409254 RAVER1Q8IY67 606 aaKnown RBP13.17□□□□□ -0.3
LIMS2-203ENST00000409254 CAMKK1Q8N5S9 505 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 RAB7BQ96AH8 199 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 SNF8Q96H20 258 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 TDRD1Q9BXT4 1180 aaKnown RBP13.17□□□□□ -0.3
LIMS2-203ENST00000409254 ADGRE3Q9BY15 652 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 FOXQ1Q9C009 403 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 ARNT2Q9HBZ2 717 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 NOD2Q9HC29 1040 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 DLGAP2Q9P1A6 1054 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 WHRNQ9P202 907 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms