RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 TRIM24O15164 1050 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 GCATO75600 419 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 CLIC3O95833 236 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 LBPP18428 481 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 CLCN3P51790 818 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 HMGCS2P54868 508 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 LAMTOR4Q0VGL1 99 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 MTA1Q13330 715 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 TOP3AQ13472 1001 aaPredicted RBP7.46□□□□□ -1.21
HDAC9-202ENST00000405010 EFCAB12Q6NXP0 572 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 BORAQ6PGQ7 559 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 TIFABQ6ZNK6 161 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 PAGE2Q7Z2X7 111 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 CENPLQ8N0S6 344 aaPredicted RBP7.46□□□□□ -1.21
HDAC9-202ENST00000405010 FBXO30Q8TB52 745 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 PNPT1Q8TCS8 783 aaKnown RBP7.46□□□□□ -1.21
HDAC9-202ENST00000405010 IRGQQ8WZA9 623 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 VPS33AQ96AX1 596 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 ZHX1-C8orf76Q96EF9 292 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 MFSD3Q96ES6 412 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 SIGLEC10Q96LC7 697 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 ZNF560Q96MR9 790 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 SPATA33Q96N06 139 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 TRIM39Q9HCM9 518 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 MKS1Q9NXB0 559 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 SUCOQ9UBS9 1254 aaKnown RBP7.46□□□□□ -1.21
HDAC9-202ENST00000405010 OAZ3Q9UMX2 235 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 SCAF8Q9UPN6 1271 aaKnown RBP7.46□□□□□ -1.21
HDAC9-202ENST00000405010 BTBD3Q9Y2F9 522 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 PCDHGA4Q9Y5G9 962 aa7.46□□□□□ -1.21
HDAC9-202ENST00000405010 COPG1Q9Y678 874 aaKnown RBP7.46□□□□□ -1.21
HDAC9-202ENST00000405010 ERI2A8K979 691 aaKnown RBP7.46□□□□□ -1.22
HDAC9-202ENST00000405010 E5RI56 91 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 NCAM2O15394 837 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 FAM20BO75063 409 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 NCAM1P13591 858 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 PTPN1P18031 435 aaKnown RBP7.46□□□□□ -1.22
HDAC9-202ENST00000405010 PCSK6P29122 969 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 TM4SF1P30408 202 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 TCF7P36402 384 aaPredicted RBP7.46□□□□□ -1.22
HDAC9-202ENST00000405010 HARS2P49590 506 aaKnown RBP7.46□□□□□ -1.22
HDAC9-202ENST00000405010 GEMP55040 296 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 TRIM32Q13049 653 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 GRM2Q14416 872 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 GRM3Q14832 879 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 TGFBIQ15582 683 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 CERCAMQ5T4B2 595 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 ANGPTL8Q6UXH0 198 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 CAND1Q86VP6 1230 aaKnown RBP7.46□□□□□ -1.22
HDAC9-202ENST00000405010 FAM126BQ8IXS8 530 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 DEFB106AQ8N104 65 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 TTC30BQ8N4P2 665 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 LEMD2Q8NC56 503 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 SETD9Q8NE22 299 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 MCFD2Q8NI22 146 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 ZNF420Q8TAQ5 688 aaPredicted RBP7.46□□□□□ -1.22
HDAC9-202ENST00000405010 OTUD5Q96G74 571 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 CELF6Q96J87 481 aaKnown RBP7.46□□□□□ -1.22
HDAC9-202ENST00000405010 HOPXQ9BPY8 73 aaPredicted RBP7.46□□□□□ -1.22
HDAC9-202ENST00000405010 NTPCRQ9BSD7 190 aaKnown RBP7.46□□□□□ -1.22
HDAC9-202ENST00000405010 UGT2B28Q9BY64 529 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 HOXC10Q9NYD6 342 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 TMEM9Q9P0T7 183 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 IFT80Q9P2H3 777 aaPredicted RBP7.46□□□□□ -1.22
HDAC9-202ENST00000405010 TUBGCP4Q9UGJ1 667 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 USP21Q9UK80 565 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 PSME2Q9UL46 239 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 TRAF6Q9Y4K3 522 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 NR2E3Q9Y5X4 410 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 RAD54BQ9Y620 910 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 CEPT1Q9Y6K0 416 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 PNMA8CA0A1B0GUJ8 204 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 CENPXA8MT69 81 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 C9JVG2 144 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 TNPO2O14787 897 aaKnown RBP7.46□□□□□ -1.22
HDAC9-202ENST00000405010 CCNKO75909 580 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 CLPXO76031 633 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 MYO1DO94832 1006 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 LTFP02788 710 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 SOX6P35712 828 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 CDH13P55290 713 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 CDKL1Q00532 357 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 TRAP1Q12931 704 aaKnown RBP7.46□□□□□ -1.22
HDAC9-202ENST00000405010 SPDYE2Q495Y8 402 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 TEX44Q53QW1 395 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 SLC39A4Q6P5W5 647 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 GADL1Q6ZQY3 521 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 THAP5Q7Z6K1 395 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 CUZD1Q86UP6 607 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 APPL2Q8NEU8 664 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 PROX1Q92786 737 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 PABPC5Q96DU9 382 aaKnown RBP7.46□□□□□ -1.22
HDAC9-202ENST00000405010 CSPG4P5Q96PW8 444 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 ROGDIQ9GZN7 287 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 SENP6Q9GZR1 1112 aaPredicted RBP7.46□□□□□ -1.22
HDAC9-202ENST00000405010 NACA2Q9H009 215 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 ATXN3LQ9H3M9 355 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 TMEM134Q9H6X4 195 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 SP110Q9HB58 689 aa7.46□□□□□ -1.22
HDAC9-202ENST00000405010 STK32BQ9NY57 414 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms