RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 VPS18Q9P253 973 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 SLCO3A1Q9UIG8 710 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 PCDHGC4Q9Y5F7 938 aa3.76□□□□□ -1.81
RTN4-208ENST00000404909 DOCK8Q8NF50 2099 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 FOXO6A8MYZ6 492 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 RGS16O15492 202 aaPredicted RBP3.75□□□□□ -1.81
RTN4-208ENST00000404909 NFATC1O95644 943 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 SLC4A1P02730 911 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 PRKCGP05129 697 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 POLBP06746 335 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 IVLP07476 585 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 POLR2EP19388 210 aaKnown RBP3.75□□□□□ -1.81
RTN4-208ENST00000404909 FCARP24071 287 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 GDI1P31150 447 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 GKP32189 559 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 HPDP32754 393 aaPredicted RBP3.75□□□□□ -1.81
RTN4-208ENST00000404909 DGKGP49619 791 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 SERPINH1P50454 418 aaKnown RBP3.75□□□□□ -1.81
RTN4-208ENST00000404909 GYS2P54840 703 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 SKOR1P84550 965 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 CDK18Q07002 472 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 GEN1Q17RS7 908 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 CTC1Q2NKJ3 1217 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 KBTBD12Q3ZCT8 623 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 INO80DQ53TQ3 878 aaPredicted RBP3.75□□□□□ -1.81
RTN4-208ENST00000404909 TTMPQ5BVD1 217 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 TRMT10BQ6PF06 316 aaKnown RBP3.75□□□□□ -1.81
RTN4-208ENST00000404909 VITQ6UXI7 678 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 Q7L0L9 218 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 BLOC1S5Q8TDH9 187 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 ZNF669Q96BR6 464 aaPredicted RBP3.75□□□□□ -1.81
RTN4-208ENST00000404909 RMDN1Q96DB5 314 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 LRRC39Q96DD0 335 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 MFSD3Q96ES6 412 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 PLA2G2FQ9BZM2 168 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 PHACTR1Q9C0D0 580 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 IL22Q9GZX6 179 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 ECT2Q9H8V3 914 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 CASS4Q9NQ75 786 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 SLC25A13Q9UJS0 675 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 CHKBQ9Y259 395 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 IKBKGQ9Y6K9 419 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 GOLGA8KD6RF30 607 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 GOLGA8TH3BQL2 631 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 TULP3O75386 442 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 TCF3P15923 654 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 PSMC3P17980 439 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 PGAM1P18669 254 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 ADRA1AP35348 466 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 MTHFRP42898 656 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 SLC6A11P48066 632 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 GEMIN4P57678 1058 aaKnown RBP3.75□□□□□ -1.81
RTN4-208ENST00000404909 CBX1P83916 185 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 ECT2LQ008S8 904 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 KDSRQ06136 332 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 MESP2Q0VG99 397 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 STAT4Q14765 748 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 TMED2Q15363 201 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 SLC1A5Q15758 541 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 MBLAC2Q68D91 279 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 NAIF1Q69YI7 327 aaPredicted RBP3.75□□□□□ -1.81
RTN4-208ENST00000404909 KDELC1Q6UW63 502 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 RANBP10Q6VN20 620 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 MFSD6LQ8IWD5 586 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 PPM1NQ8N819 430 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 ZNF366Q8N895 744 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 SMRP1Q8NCR6 262 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 LPCAT1Q8NF37 534 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 GSDMBQ8TAX9 411 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 ERLEC1Q96DZ1 483 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 NSMCE3Q96MG7 304 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 ZNF778Q96MU6 729 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 CYTH2Q99418 400 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 SH3GL2Q99962 352 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 FAM83CQ9BQN1 747 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 TMBIM4Q9HC24 238 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 DEC1Q9P2X7 70 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 EVLQ9UI08 416 aaPredicted RBP3.75□□□□□ -1.81
RTN4-208ENST00000404909 RABGEF1Q9UJ41 708 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 NOVA2Q9UNW9 492 aaKnown RBP3.75□□□□□ -1.81
RTN4-208ENST00000404909 USP15Q9Y4E8 981 aaPredicted RBP3.75□□□□□ -1.81
RTN4-208ENST00000404909 RAI2Q9Y5P3 530 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 TBC1D3BA6NDS4 549 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 BUD23O43709 281 aaKnown RBP3.75□□□□□ -1.81
RTN4-208ENST00000404909 PAPLNO95428 1278 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 PDHA1P08559 390 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 F7P08709 466 aaPredicted RBP3.75□□□□□ -1.81
RTN4-208ENST00000404909 ABHD2P08910 425 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 ERVK-10P10266 1014 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 SRCP12931 536 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 STX2P32856 288 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 MSH2P43246 934 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 NPY2RP49146 381 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 EPHB1P54762 984 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 MAGOHP61326 146 aaKnown RBP3.75□□□□□ -1.81
RTN4-208ENST00000404909 SLC12A1Q13621 1099 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 CRYMQ14894 314 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 DLG2Q15700 870 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 SIRPB2Q5JXA9 342 aa3.75□□□□□ -1.81
RTN4-208ENST00000404909 DGKKQ5KSL6 1271 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms