RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 TRMT13Q9NUP7 481 aaKnown RBP20.08■□□□□ 0.8
CCDC47-202ENST00000403162 PADI4Q9UM07 663 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 PCDHGB4Q9UN71 923 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 G3BP2Q9UN86 482 aaKnown RBP20.08■□□□□ 0.8
CCDC47-202ENST00000403162 NOD1Q9Y239 953 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 PCDHGB5Q9Y5G0 923 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 AP3B1O00203 1094 aa20.07■□□□□ 0.8
CCDC47-202ENST00000403162 CFLARO15519 480 aa20.07■□□□□ 0.8
CCDC47-202ENST00000403162 SLC12A1Q13621 1099 aa20.07■□□□□ 0.8
CCDC47-202ENST00000403162 TMEM259Q4ZIN3 620 aa20.07■□□□□ 0.8
CCDC47-202ENST00000403162 TMEM198Q66K66 360 aa20.07■□□□□ 0.8
CCDC47-202ENST00000403162 KLHDC10Q6PID8 442 aa20.07■□□□□ 0.8
CCDC47-202ENST00000403162 KCTD13Q8WZ19 329 aa20.07■□□□□ 0.8
CCDC47-202ENST00000403162 USP13Q92995 863 aaPredicted RBP20.07■□□□□ 0.8
CCDC47-202ENST00000403162 HDAC11Q96DB2 347 aa20.07■□□□□ 0.8
CCDC47-202ENST00000403162 DMTF1Q9Y222 760 aa20.07■□□□□ 0.8
CCDC47-202ENST00000403162 DNAH12Q6ZR08 3092 aa20.07■□□□□ 0.8
CCDC47-202ENST00000403162 FAM58BPP0C7Q3 252 aa20.07■□□□□ 0.8
CCDC47-202ENST00000403162 SLC35E2BP0CK96 405 aa20.07■□□□□ 0.8
CCDC47-202ENST00000403162 PNPLA4P41247 253 aa20.07■□□□□ 0.8
CCDC47-202ENST00000403162 TMEM102Q8N9M5 508 aaPredicted RBP20.07■□□□□ 0.8
CCDC47-202ENST00000403162 B3GALNT2Q8NCR0 500 aa20.07■□□□□ 0.8
CCDC47-202ENST00000403162 DDI1Q8WTU0 396 aa20.07■□□□□ 0.8
CCDC47-202ENST00000403162 ARMC5Q96C12 935 aa20.07■□□□□ 0.8
CCDC47-202ENST00000403162 VAT1Q99536 393 aa20.07■□□□□ 0.8
CCDC47-202ENST00000403162 SLC2A11Q9BYW1 496 aa20.07■□□□□ 0.8
CCDC47-202ENST00000403162 RECQL4O94761 1208 aa20.06■□□□□ 0.8
CCDC47-202ENST00000403162 NFKB1P19838 968 aa20.06■□□□□ 0.8
CCDC47-202ENST00000403162 DNAJB2P25686 324 aa20.06■□□□□ 0.8
CCDC47-202ENST00000403162 NMBRP28336 390 aa20.06■□□□□ 0.8
CCDC47-202ENST00000403162 MSX2P35548 267 aaPredicted RBP20.06■□□□□ 0.8
CCDC47-202ENST00000403162 TPI1P60174 286 aa20.06■□□□□ 0.8
CCDC47-202ENST00000403162 ZBTB17Q13105 803 aa20.06■□□□□ 0.8
CCDC47-202ENST00000403162 USP10Q14694 798 aaKnown RBP20.06■□□□□ 0.8
CCDC47-202ENST00000403162 NXNQ6DKJ4 435 aa20.06■□□□□ 0.8
CCDC47-202ENST00000403162 LRRC8EQ6NSJ5 796 aa20.06■□□□□ 0.8
CCDC47-202ENST00000403162 BORAQ6PGQ7 559 aa20.06■□□□□ 0.8
CCDC47-202ENST00000403162 FSTL5Q8N475 847 aaPredicted RBP20.06■□□□□ 0.8
CCDC47-202ENST00000403162 ADAM32Q8TC27 787 aa20.06■□□□□ 0.8
CCDC47-202ENST00000403162 SCYL1Q96KG9 808 aa20.06■□□□□ 0.8
CCDC47-202ENST00000403162 KLHL32Q96NJ5 620 aa20.06■□□□□ 0.8
CCDC47-202ENST00000403162 KIFC1Q9BW19 673 aa20.06■□□□□ 0.8
CCDC47-202ENST00000403162 ACSS2Q9NR19 701 aa20.06■□□□□ 0.8
CCDC47-202ENST00000403162 RUVBL2Q9Y230 463 aaKnown RBP20.06■□□□□ 0.8
CCDC47-202ENST00000403162 COPG1Q9Y678 874 aaKnown RBP20.06■□□□□ 0.8
CCDC47-202ENST00000403162 FNDC1Q4ZHG4 1894 aaPredicted RBP20.06■□□□□ 0.8
CCDC47-202ENST00000403162 TCAF2A6NFQ2 919 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 PHGDHO43175 533 aaKnown RBP20.05■□□□□ 0.8
CCDC47-202ENST00000403162 TMCC1O94876 653 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 JUNP05412 331 aaKnown RBP20.05■□□□□ 0.8
CCDC47-202ENST00000403162 NPR3P17342 541 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 CDH17Q12864 832 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 NOTUMQ6P988 496 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 CENPLQ8N0S6 344 aaPredicted RBP20.05■□□□□ 0.8
CCDC47-202ENST00000403162 NPWQ8N729 165 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 RNF169Q8NCN4 708 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 KCTD4Q8WVF5 259 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 MAELQ96JY0 434 aaKnown RBP20.05■□□□□ 0.8
CCDC47-202ENST00000403162 H0YJX3 145 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 M0QZ92 97 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 TRIM38O00635 465 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 DARSP14868 501 aaKnown RBP20.05■□□□□ 0.8
CCDC47-202ENST00000403162 PSMD8P48556 350 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 POLD2P49005 469 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 NDUFV1P49821 464 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 TAF6P49848 677 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 MRPS6P82932 125 aaKnown RBP20.05■□□□□ 0.8
CCDC47-202ENST00000403162 CDKL1Q00532 357 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 GALNT2Q10471 571 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 GK3PQ14409 553 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 MYLK3Q32MK0 819 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 C6orf52Q5T4I8 152 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 CATSPER4Q7RTX7 472 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 KDM1BQ8NB78 822 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 APOL2Q9BQE5 337 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 GRIP2Q9C0E4 1043 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 NXF3Q9H4D5 531 aaKnown RBP20.05■□□□□ 0.8
CCDC47-202ENST00000403162 LRRC4Q9HBW1 653 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 WDR6Q9NNW5 1121 aaKnown RBP20.05■□□□□ 0.8
CCDC47-202ENST00000403162 UTP6Q9NYH9 597 aaKnown RBP20.05■□□□□ 0.8
CCDC47-202ENST00000403162 APPL1Q9UKG1 709 aa20.05■□□□□ 0.8
CCDC47-202ENST00000403162 STX16-NPEPL1H3BU86 382 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 ARVCFO00192 962 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 DLX3O60479 287 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 NPHS1O60500 1241 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 VAPBO95292 243 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 GLRBP48167 497 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 CRYBB1P53674 252 aaPredicted RBP20.04■□□□□ 0.8
CCDC47-202ENST00000403162 ADRM1Q16186 407 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 NAPEPLDQ6IQ20 393 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 HFE2Q6ZVN8 426 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 SIX6OS1Q8N1H7 587 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 RNF148Q8N7C7 305 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 SLC43A3Q8NBI5 491 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 ZFP28Q8NHY6 868 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 SENP6Q9GZR1 1112 aaPredicted RBP20.04■□□□□ 0.8
CCDC47-202ENST00000403162 TRPV6Q9H1D0 765 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 RNF19AQ9NV58 838 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 MAGED2Q9UNF1 606 aaPredicted RBP20.04■□□□□ 0.8
CCDC47-202ENST00000403162 TRPC5OSA6NMA1 111 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms