RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 CEP44Q9C0F1 390 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 TKTL2Q9H0I9 626 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 SYNCQ9H7C4 482 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 FZD3Q9NPG1 666 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 GPR27Q9NS67 375 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 PIGVQ9NUD9 493 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.93□□□□□ -0.98
CAPN3-208ENST00000397204 APEX2Q9UBZ4 518 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 U3KQA8 63 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 MYLKQ15746 1914 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 AHCTF1Q8WYP5 2266 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 BOD1L1Q8NFC6 3051 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 IGLV3-10A0A075B6K4 115 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 A0A0D9SEW6 157 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 CPED1A4D0V7 1026 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 GTPBP10A4D1E9 387 aaKnown RBP8.92□□□□□ -0.98
CAPN3-208ENST00000397204 FPGTO14772 594 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 KLK10O43240 276 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 AQP9O43315 295 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 TSPAN6O43657 245 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 ZNF821O75541 412 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-208ENST00000397204 DAB1O75553 588 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 LEFTY1O75610 366 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 WFS1O76024 890 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 NEBLO76041 1014 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 NME1P15531 152 aaKnown RBP8.92□□□□□ -0.98
CAPN3-208ENST00000397204 SLC9A1P19634 815 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 ITGB7P26010 798 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 OR1E1P30953 314 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 SCNN1AP37088 669 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 RABIFP47224 123 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 STX17P56962 302 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 EXOC3L4Q17RC7 722 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 SLC25A52Q3SY17 297 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 ALFQ53S48 1182 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 CARD16Q5EG05 197 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 GJB7Q6PEY0 223 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 LINGO4Q6UY18 593 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 GBP6Q6ZN66 633 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 PARGQ86W56 976 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 PCDH20Q8N6Y1 951 aaKnown RBP8.92□□□□□ -0.98
CAPN3-208ENST00000397204 ZNF548Q8NEK5 533 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-208ENST00000397204 WDR48Q8TAF3 677 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 IFI44Q8TCB0 444 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 BTN2A2Q8WVV5 523 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 ZNF592Q92610 1267 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 GLMNQ92990 594 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 RAB7BQ96AH8 199 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 ISG20Q96AZ6 181 aaKnown RBP8.92□□□□□ -0.98
CAPN3-208ENST00000397204 VCPIP1Q96JH7 1222 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 HAPLN3Q96S86 360 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 SPON2Q9BUD6 331 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 TNKS2Q9H2K2 1166 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 RETREG1Q9H6L5 497 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 ZNF395Q9H8N7 513 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-208ENST00000397204 CPNE5Q9HCH3 593 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 ASCL3Q9NQ33 180 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 STAP1Q9ULZ2 295 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 CTNND2Q9UQB3 1225 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 PCDHGA8Q9Y5G5 932 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 FADS3Q9Y5Q0 445 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 TLN1Q9Y490 2541 aaKnown RBP8.92□□□□□ -0.98
CAPN3-208ENST00000397204 DOCK9Q9BZ29 2069 aa8.92□□□□□ -0.98
CAPN3-208ENST00000397204 EME2A4GXA9 379 aaPredicted RBP8.91□□□□□ -0.98
CAPN3-208ENST00000397204 B8ZZF3 427 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 RNF103O00237 685 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 FOXN3O00409 490 aaPredicted RBP8.91□□□□□ -0.98
CAPN3-208ENST00000397204 SPINT1O43278 529 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 TCEA3O75764 348 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 ZMPSTE24O75844 475 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 ENDOD1O94919 500 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 ERBB2P04626 1255 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 MYF5P13349 255 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 C6P13671 934 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 ADRB3P13945 408 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 TGM2P21980 687 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 PON1P27169 355 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 GABRB2P47870 512 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 SERPINH1P50454 418 aaKnown RBP8.91□□□□□ -0.98
CAPN3-208ENST00000397204 DNA2P51530 1060 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 RNASE9P60153 205 aaKnown RBP8.91□□□□□ -0.98
CAPN3-208ENST00000397204 DEUP1Q05D60 604 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 FGL2Q14314 439 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 LCE2AQ5TA79 106 aaPredicted RBP8.91□□□□□ -0.98
CAPN3-208ENST00000397204 C22orf39Q6P5X5 142 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 PTAR1Q7Z6K3 402 aaPredicted RBP8.91□□□□□ -0.98
CAPN3-208ENST00000397204 TFAP2DQ7Z6R9 452 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 PASD1Q8IV76 773 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 ARL14Q8N4G2 192 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 TMEM35BQ8NCS4 154 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 DENND6BQ8NEG7 585 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 GRIN3AQ8TCU5 1115 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 C18orf8Q96DM3 657 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 TBATAQ96M53 351 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 KLF6Q99612 283 aaPredicted RBP8.91□□□□□ -0.98
CAPN3-208ENST00000397204 IL12RB2Q99665 862 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 ANLNQ9NQW6 1124 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 MPP6Q9NZW5 540 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 SPASTQ9UBP0 616 aa8.91□□□□□ -0.98
CAPN3-208ENST00000397204 GTF3C3Q9Y5Q9 886 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms