RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 PAK4O96013 591 aaPredicted RBP13.94□□□□□ -0.18
CXCL12-205ENST00000395794 GRM3Q14832 879 aa13.94□□□□□ -0.18
CXCL12-205ENST00000395794 SHBQ15464 509 aa13.94□□□□□ -0.18
CXCL12-205ENST00000395794 TMEM259Q4ZIN3 620 aa13.94□□□□□ -0.18
CXCL12-205ENST00000395794 CFAP58Q5T655 872 aa13.94□□□□□ -0.18
CXCL12-205ENST00000395794 GATA6Q92908 595 aa13.94□□□□□ -0.18
CXCL12-205ENST00000395794 CNDP2Q96KP4 475 aaKnown RBP13.94□□□□□ -0.18
CXCL12-205ENST00000395794 SNRNP25Q9BV90 132 aaKnown RBP13.94□□□□□ -0.18
CXCL12-205ENST00000395794 C1QTNF7Q9BXJ2 289 aa13.94□□□□□ -0.18
CXCL12-205ENST00000395794 KLHL11Q9NVR0 708 aa13.94□□□□□ -0.18
CXCL12-205ENST00000395794 IPO11Q9UI26 975 aaKnown RBP13.94□□□□□ -0.18
CXCL12-205ENST00000395794 ZFR2Q9UPR6 939 aaKnown RBP13.94□□□□□ -0.18
CXCL12-205ENST00000395794 MFHAS1Q9Y4C4 1052 aa13.94□□□□□ -0.18
CXCL12-205ENST00000395794 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.94□□□□□ -0.18
CXCL12-205ENST00000395794 HS3ST3A1Q9Y663 406 aa13.94□□□□□ -0.18
CXCL12-205ENST00000395794 PLXNA2O75051 1894 aa13.93□□□□□ -0.18
CXCL12-205ENST00000395794 IGLON5A6NGN9 336 aa13.93□□□□□ -0.18
CXCL12-205ENST00000395794 H3BRJ5 948 aa13.93□□□□□ -0.18
CXCL12-205ENST00000395794 ENC1O14682 589 aa13.93□□□□□ -0.18
CXCL12-205ENST00000395794 FPGTO14772 594 aa13.93□□□□□ -0.18
CXCL12-205ENST00000395794 CDK4P11802 303 aa13.93□□□□□ -0.18
CXCL12-205ENST00000395794 PCK1P35558 622 aa13.93□□□□□ -0.18
CXCL12-205ENST00000395794 PBX1P40424 430 aa13.93□□□□□ -0.18
CXCL12-205ENST00000395794 ARL4AP40617 200 aa13.93□□□□□ -0.18
CXCL12-205ENST00000395794 HCAR3P49019 387 aa13.93□□□□□ -0.18
CXCL12-205ENST00000395794 SUOXP51687 545 aa13.93□□□□□ -0.18
CXCL12-205ENST00000395794 CLDN2P57739 230 aa13.93□□□□□ -0.18
CXCL12-205ENST00000395794 BNIP3Q12983 259 aa13.93□□□□□ -0.18
CXCL12-205ENST00000395794 PIGHQ14442 188 aaPredicted RBP13.93□□□□□ -0.18
CXCL12-205ENST00000395794 CA9Q16790 459 aa13.93□□□□□ -0.18
CXCL12-205ENST00000395794 BOLA3Q53S33 107 aa13.93□□□□□ -0.18
CXCL12-205ENST00000395794 Q6ZSR6 202 aa13.93□□□□□ -0.18
CXCL12-205ENST00000395794 PTAR1Q7Z6K3 402 aaPredicted RBP13.93□□□□□ -0.18
CXCL12-205ENST00000395794 PAF1Q8N7H5 531 aa13.93□□□□□ -0.18
CXCL12-205ENST00000395794 KDF1Q8NAX2 398 aaPredicted RBP13.93□□□□□ -0.18
CXCL12-205ENST00000395794 ZCCHC14Q8WYQ9 949 aaKnown RBP13.93□□□□□ -0.18
CXCL12-205ENST00000395794 CELF6Q96J87 481 aaKnown RBP13.93□□□□□ -0.18
CXCL12-205ENST00000395794 TRIM7Q9C029 511 aa13.93□□□□□ -0.18
CXCL12-205ENST00000395794 KLC2Q9H0B6 622 aa13.93□□□□□ -0.18
CXCL12-205ENST00000395794 LRRC19Q9H756 370 aa13.93□□□□□ -0.18
CXCL12-205ENST00000395794 SP110Q9HB58 689 aa13.93□□□□□ -0.18
CXCL12-205ENST00000395794 DOCK4Q8N1I0 1966 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 CHD8Q9HCK8 2581 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 DFFAO00273 331 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 CBFA2T2O43439 604 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 PRAMEF11O60813 436 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 SDC3O75056 442 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 LRCH4O75427 683 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 PALMO75781 387 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 C1SP09871 688 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 ERCC2P18074 760 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 ABL2P42684 1182 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 RABIFP47224 123 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 PAPOLAP51003 745 aaKnown RBP13.92□□□□□ -0.18
CXCL12-205ENST00000395794 CYTH1Q15438 398 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 HGSNATQ68CP4 663 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 CCNI2Q6ZMN8 369 aaPredicted RBP13.92□□□□□ -0.18
CXCL12-205ENST00000395794 TMPRSS7Q7RTY8 843 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 ABI3BPQ7Z7G0 1075 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 LZTR1Q8N653 840 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 ARFGAP1Q8N6T3 406 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 OR13H1Q8NG92 308 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 CXorf40AQ8TE69 158 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 ASB12Q8WXK4 309 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 IFT43Q96FT9 208 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 EXOC2Q96KP1 924 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 LENG8Q96PV6 779 aaPredicted RBP13.92□□□□□ -0.18
CXCL12-205ENST00000395794 PEBP4Q96S96 227 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 KCTD15Q96SI1 283 aaPredicted RBP13.92□□□□□ -0.18
CXCL12-205ENST00000395794 C1QTNF2Q9BXJ5 285 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 CPEB1Q9BZB8 566 aaKnown RBP13.92□□□□□ -0.18
CXCL12-205ENST00000395794 SLC39A8Q9C0K1 460 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 SCUBE2Q9NQ36 999 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 TOR4AQ9NXH8 423 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 DKK3Q9UBP4 350 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 IP6K2Q9UHH9 426 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 ZMIZ1Q9ULJ6 1067 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 PCDHGA1Q9Y5H4 931 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 CEP295Q9C0D2 2601 aa13.92□□□□□ -0.18
CXCL12-205ENST00000395794 PCNX2A6NKB5 2137 aa13.91□□□□□ -0.18
CXCL12-205ENST00000395794 NEMP2A6NFY4 417 aa13.91□□□□□ -0.18
CXCL12-205ENST00000395794 J3KR12 359 aa13.91□□□□□ -0.18
CXCL12-205ENST00000395794 TPM1P09493 284 aa13.91□□□□□ -0.18
CXCL12-205ENST00000395794 ALPPL2P10696 532 aa13.91□□□□□ -0.18
CXCL12-205ENST00000395794 SSR1P43307 286 aaKnown RBP13.91□□□□□ -0.18
CXCL12-205ENST00000395794 ELP6Q0PNE2 266 aa13.91□□□□□ -0.18
CXCL12-205ENST00000395794 RFTN1Q14699 578 aaPredicted RBP13.91□□□□□ -0.18
CXCL12-205ENST00000395794 TSR1Q2NL82 804 aaKnown RBP13.91□□□□□ -0.18
CXCL12-205ENST00000395794 CCDC122Q5T0U0 273 aa13.91□□□□□ -0.18
CXCL12-205ENST00000395794 ERAP2Q6P179 960 aa13.91□□□□□ -0.18
CXCL12-205ENST00000395794 KYAT3Q6YP21 454 aaKnown RBP13.91□□□□□ -0.18
CXCL12-205ENST00000395794 GCNT7Q6ZNI0 430 aa13.91□□□□□ -0.18
CXCL12-205ENST00000395794 NETO2Q8NC67 525 aa13.91□□□□□ -0.18
CXCL12-205ENST00000395794 DENND6BQ8NEG7 585 aa13.91□□□□□ -0.18
CXCL12-205ENST00000395794 HCAR2Q8TDS4 363 aa13.91□□□□□ -0.18
CXCL12-205ENST00000395794 HSPH1Q92598 858 aa13.91□□□□□ -0.18
CXCL12-205ENST00000395794 ZNF641Q96N77 438 aaPredicted RBP13.91□□□□□ -0.18
CXCL12-205ENST00000395794 CINPQ9BW66 212 aaPredicted RBP13.91□□□□□ -0.18
CXCL12-205ENST00000395794 TMEM121BQ9BXQ6 578 aaPredicted RBP13.91□□□□□ -0.18
CXCL12-205ENST00000395794 THAP2Q9H0W7 228 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms