RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 AGO1Q9UL18 857 aaKnown RBP13.32□□□□□ -0.28
NPHP4-203ENST00000378169 BTRCQ9Y297 605 aa13.32□□□□□ -0.28
NPHP4-203ENST00000378169 MYH3P11055 1940 aa13.32□□□□□ -0.28
NPHP4-203ENST00000378169 MAP1BP46821 2468 aaKnown RBP13.32□□□□□ -0.28
NPHP4-203ENST00000378169 C1orf232A0A0U1RR37 186 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 OR6C75A6NL08 312 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 GCATO75600 419 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 SMNDC1O75940 238 aaKnown RBP eCLIP13.31□□□□□ -0.28
NPHP4-203ENST00000378169 CHRNA4P43681 627 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 AIF1P55008 147 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 GRM3Q14832 879 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 KRT72Q14CN4 511 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 IL27RAQ6UWB1 636 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 LINGO4Q6UY18 593 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 TRMT11Q7Z4G4 463 aaKnown RBP13.31□□□□□ -0.28
NPHP4-203ENST00000378169 LRRC49Q8IUZ0 686 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 MPP5Q8N3R9 675 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 OR56A4Q8NGH8 313 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 AGAP2Q99490 1192 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 BCO2Q9BYV7 579 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 DPY30Q9C005 99 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 WDR41Q9HAD4 459 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 APPL1Q9UKG1 709 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 AHDC1Q5TGY3 1603 aaPredicted RBP13.31□□□□□ -0.28
NPHP4-203ENST00000378169 GRIN2DO15399 1336 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 A0A087X1B8 175 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 SEC22BO75396 215 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 ATP6V1B2P21281 511 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 SERPINA4P29622 427 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 SEMA5AQ13591 1074 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 DMC1Q14565 340 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 DPYSL2Q16555 572 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 ZNF792Q3KQV3 632 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 STXBP5Q5T5C0 1151 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 LZICQ8WZA0 190 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 TMEM159Q96B96 161 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 TBATAQ96M53 351 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 SPATA16Q9BXB7 569 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 COPS7BQ9H9Q2 264 aaPredicted RBP13.31□□□□□ -0.28
NPHP4-203ENST00000378169 ARL15Q9NXU5 204 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 LGALS13Q9UHV8 139 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 TMEM88BA6NKF7 163 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 PSMG1O95456 288 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 KRT6AP02538 564 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 KRT6BP04259 564 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 TKTP29401 623 aaKnown RBP13.31□□□□□ -0.28
NPHP4-203ENST00000378169 KRT6CP48668 564 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 INPP1P49441 399 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 PRIM2P49643 509 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 OCA2Q04671 838 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 DET1Q7L5Y6 550 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 NAT8LQ8N9F0 302 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 OR7D4Q8NG98 312 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 GDPD5Q8WTR4 605 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 SLC35F5Q8WV83 523 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 UCMAQ8WVF2 138 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 TSPAN18Q96SJ8 248 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 ABCG8Q9H221 673 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 SEMA6AQ9H2E6 1030 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 COL18A1P39060 1754 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 CCDC88AQ3V6T2 1871 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 TK2O00142 265 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 FFAR3O14843 346 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 GPR42O15529 346 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 ZNF682O95780 498 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 EPB42P16452 691 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 PSMC3P17980 439 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 WARSP23381 471 aaKnown RBP13.31□□□□□ -0.28
NPHP4-203ENST00000378169 MPSTP25325 297 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 GABRR2P28476 465 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 ATP6V1E1P36543 226 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 SLC25A11Q02978 314 aaKnown RBP13.31□□□□□ -0.28
NPHP4-203ENST00000378169 OASLQ15646 514 aaKnown RBP13.31□□□□□ -0.28
NPHP4-203ENST00000378169 HIST2H2ACQ16777 129 aaPredicted RBP13.31□□□□□ -0.28
NPHP4-203ENST00000378169 MSS51Q4VC12 460 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 LIPMQ5VYY2 423 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 HIST2H2AA3Q6FI13 130 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 OLFML1Q6UWY5 402 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 DENND6AQ8IWF6 608 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 CRYBG2Q8N1P7 616 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 CDYL2Q8N8U2 506 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 OR6Y1Q8NGX8 325 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 MTFMTQ96DP5 389 aaKnown RBP13.31□□□□□ -0.28
NPHP4-203ENST00000378169 DACH2Q96NX9 599 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 SIKE1Q9BRV8 207 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 TMEM216Q9P0N5 145 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 COPG2Q9UBF2 871 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 KLQ9UEF7 1012 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 POLG2Q9UHN1 485 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 FZD10Q9ULW2 581 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 RAP2CQ9Y3L5 183 aa13.31□□□□□ -0.28
NPHP4-203ENST00000378169 CLUHO75153 1309 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 PCDH8O95206 1070 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 F2P00734 622 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 C1RP00736 705 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 PCNAP12004 261 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 MSH3P20585 1137 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 NMBRP28336 390 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 GDF6Q6KF10 455 aaPredicted RBP13.3□□□□□ -0.28
NPHP4-203ENST00000378169 LRRC8DQ7L1W4 858 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms