RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 VTI1BQ9UEU0 232 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 SNX13Q9Y5W8 968 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 SNX10Q9Y5X0 201 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 TARM1B6A8C7 271 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 SDHDO14521 159 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 ELNP15502 786 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 CSE1LP55060 971 aaKnown RBP14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 PDAP1Q13442 181 aaKnown RBP14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 HERC3Q15034 1050 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 MTX3Q5HYI7 312 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 LAYNQ6UX15 382 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 UNC93AQ86WB7 457 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 MFSD6LQ8IWD5 586 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 CNTD1Q8N815 330 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 RIN3Q8TB24 985 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 SLCO4A1Q96BD0 722 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 CIB1Q99828 191 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 TMEM79Q9BSE2 394 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 GMPR2Q9P2T1 348 aaKnown RBP14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 SLC22A2O15244 555 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 PGK1P00558 417 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 APOA4P06727 396 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 GRM5P41594 1212 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 RPL34P49207 117 aaKnown RBP14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 MPP1Q00013 466 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 CREB5Q02930 508 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 POU5F1BQ06416 359 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 TRIM25Q14258 630 aaKnown RBP14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 C9orf57Q5W0N0 161 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 ZNF280DQ6N043 979 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 LRRC8EQ6NSJ5 796 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 BORAQ6PGQ7 559 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 CNSTQ6PJW8 725 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 HMGCLL1Q8TB92 370 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 FAM110BQ8TC76 370 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 LPGAT1Q92604 370 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 FTHL17Q9BXU8 183 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 FAM124BQ9H5Z6 455 aaPredicted RBP14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 NOL11Q9H8H0 719 aaKnown RBP14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 TIMMDC1Q9NPL8 285 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 GTSE1Q9NYZ3 720 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 RSL24D1Q9UHA3 163 aaKnown RBP14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 MID2Q9UJV3 735 aa14.28□□□□□ -0.12
CLCNKA-202ENST00000375692 MYADML2A6NDP7 307 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 ALDH1A1P00352 501 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 CKMT2P17540 419 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 AKAP5P24588 427 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 CSRP3P50461 194 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 NDST2P52849 883 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 SP3Q02447 781 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 DCTN2Q13561 401 aaKnown RBP14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 RFTN1Q14699 578 aaPredicted RBP14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 KYAT1Q16773 422 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 ZNF484Q5JVG2 852 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 MARCH8Q5T0T0 291 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 OTOP3Q7RTS5 596 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 IFNLR1Q8IU57 520 aaPredicted RBP14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 LINC01465Q8N7H1 131 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 RDH11Q8TC12 318 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 SNRNP27Q8WVK2 155 aaKnown RBP14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 ASB9Q96DX5 294 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 HSPBAP1Q96EW2 488 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 ZNF597Q96LX8 424 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 NPY6RQ99463 290 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 TRPC7Q9HCX4 862 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 TNFRSF12AQ9NP84 129 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 PRORSD1PA6NEY8 169 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 H6PDO95479 791 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 JCHAINP01591 159 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 ADSLP30566 484 aaPredicted RBP14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 ACADSBP45954 432 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 SLC12A1Q13621 1099 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 PPP1R3AQ16821 1122 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 CTU1Q7Z7A3 348 aaKnown RBP14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 NT5DC4Q86YG4 428 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 HERC6Q8IVU3 1022 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 CRYBG2Q8N1P7 616 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 USP33Q8TEY7 942 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 HSFY1Q96LI6 401 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 GPR78Q96P69 363 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 SNX25Q9H3E2 840 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 RHOJQ9H4E5 214 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 GOLGA2P5Q9HBQ8 144 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 OLAHQ9NV23 265 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 CHCHD3Q9NX63 227 aaKnown RBP14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 CCDC167Q9P0B6 97 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 KLK14Q9P0G3 267 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 ACOT9Q9Y305 439 aa14.27□□□□□ -0.13
CLCNKA-202ENST00000375692 SLCO1B7G3V0H7 640 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 FBP2O00757 339 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 ZNF23P17027 643 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 ADRA1BP35368 520 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 SCNN1AP37088 669 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 STT3AP46977 705 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 ZBTB6Q15916 424 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 PITRM1Q5JRX3 1037 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 HMBOX1Q6NT76 420 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 DUS1LQ6P1R4 473 aaKnown RBP14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 LPCAT2Q7L5N7 544 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms