RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 ACSS2Q9NR19 701 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 GRHL1Q9NZI5 618 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 SCHIP1Q9P0W5 487 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-203ENST00000368207 SLC9A3R1O14745 358 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-203ENST00000368207 SNAI1O95863 264 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-203ENST00000368207 GLUD1P00367 558 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 FGF1P05230 155 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 ATP6V1B2P21281 511 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 IGFBP4P22692 258 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 CHI3L1P36222 383 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-203ENST00000368207 QPCTQ16769 361 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 SYPL2Q5VXT5 272 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 GDF6Q6KF10 455 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-203ENST00000368207 LINGO4Q6UY18 593 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 DSG4Q86SJ6 1040 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 P3H2Q8IVL5 708 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 FAM9CQ8IZT9 166 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 NKAPQ8N5F7 415 aaKnown RBP12.42□□□□□ -0.42
PTPRK-203ENST00000368207 C12orf50Q8NA57 414 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-203ENST00000368207 BATF3Q9NR55 127 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 GTF2IRD1Q9UHL9 959 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 BLOC1S6Q9UL45 172 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 AOC2O75106 756 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 FKBP6O75344 327 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 DGKAP23743 735 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 TTPAP49638 278 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 SLC25A3Q00325 362 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 USP4Q13107 963 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 SLC1A5Q15758 541 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 ZNF792Q3KQV3 632 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 C16orf87Q6PH81 154 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 NFKBIZQ9BYH8 718 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 MIEF1Q9NQG6 463 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 SAR1AQ9NR31 198 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 MYH13Q9UKX3 1938 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 PTPRJQ12913 1337 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 ALDH1A2O94788 518 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 HLA-DPA1P20036 260 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 TPSB2P20231 275 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 EPHA3P29320 983 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 DSC2Q02487 901 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 TPSAB1Q15661 275 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 AFTPHQ6ULP2 937 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 FUKQ8N0W3 1084 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 OR7D4Q8NG98 312 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 ZSCAN18Q8TBC5 510 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-203ENST00000368207 PIK3R5Q8WYR1 880 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 EMID1Q96A84 441 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-203ENST00000368207 THAP11Q96EK4 314 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 DTLQ9NZJ0 730 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 APPL1Q9UKG1 709 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 VWA7Q9Y334 891 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 SAC3D1A6NKF1 404 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 FFAR3O14843 346 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 GPR42O15529 346 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 CLDN11O75508 207 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 TACR2P21452 398 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 L1CAMP32004 1257 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 MRPS35P82673 323 aaKnown RBP12.41□□□□□ -0.42
PTPRK-203ENST00000368207 GRB14Q14449 540 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 TBCELQ5QJ74 424 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 DCAF12L1Q5VU92 463 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 FAM151BQ6UXP7 276 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 ZBTB49Q6ZSB9 765 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 PATL1Q86TB9 770 aaKnown RBP12.41□□□□□ -0.42
PTPRK-203ENST00000368207 LDB1Q86U70 411 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-203ENST00000368207 OR4L1Q8NH43 312 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 SPOCK2Q92563 424 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 KCTD14Q9BQ13 255 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-203ENST00000368207 PSMD12O00232 456 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-203ENST00000368207 CD3EAPO15446 510 aaKnown RBP12.41□□□□□ -0.42
PTPRK-203ENST00000368207 IL1BP01584 269 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 ME2P23368 584 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 KCNJ2P63252 427 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 PWP1Q13610 501 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 ZC3H12BQ5HYM0 836 aaKnown RBP12.41□□□□□ -0.42
PTPRK-203ENST00000368207 SNX30Q5VWJ9 437 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 IYDQ6PHW0 289 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 NPAS4Q8IUM7 802 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 ELMO1Q92556 727 aa12.41□□□□□ -0.42
PTPRK-203ENST00000368207 AGPSO00116 658 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 RHOQP17081 205 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 MAPK8P45983 427 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 CNTN1Q12860 1018 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 LRRC23Q53EV4 343 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-203ENST00000368207 CLEC20AQ6ZU45 233 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 IRGQQ8WZA9 623 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 FIG4Q92562 907 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 PLEKHA8Q96JA3 519 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 SIKE1Q9BRV8 207 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 RHOJQ9H4E5 214 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 WDR41Q9HAD4 459 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 CCDC154A6NI56 674 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 HNRNPCL2B2RXH8 293 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 EDF1O60869 148 aaKnown RBP12.4□□□□□ -0.42
PTPRK-203ENST00000368207 CATP04040 527 aaKnown RBP12.4□□□□□ -0.42
PTPRK-203ENST00000368207 CREB1P16220 341 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 MC4RP32245 332 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 IRF8Q02556 426 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 SMARCB1Q12824 385 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms