RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 CNOT6Q9ULM6 557 aaKnown RBP11.87□□□□□ -0.51
SHANK2-201ENST00000338508 ARHGEF40Q8TER5 1519 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 SHROOM2Q13796 1616 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 TMCC2O75069 709 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 RASGRP1O95267 797 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 HERVK_113P62684 666 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 MBTD1Q05BQ5 628 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 CXCL17Q6UXB2 119 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 ADHFE1Q8IWW8 467 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 MYCBPAPQ8TBZ2 947 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 PNPT1Q8TCS8 783 aaKnown RBP11.87□□□□□ -0.51
SHANK2-201ENST00000338508 ULBP1Q9BZM6 244 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 BRD9Q9H8M2 597 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 DNMT3LQ9UJW3 386 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 TBC1D24Q9ULP9 559 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 C1QTNF3-AMACRE9PGA6 284 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 CATP04040 527 aaKnown RBP11.87□□□□□ -0.51
SHANK2-201ENST00000338508 PCCBP05166 539 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 FDPSP14324 419 aaKnown RBP11.87□□□□□ -0.51
SHANK2-201ENST00000338508 FAAP100Q0VG06 881 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 MED22Q15528 200 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 TBC1D25Q3MII6 688 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 A0A087X1B8 175 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 ZNF208O43345 1280 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 GP5P40197 560 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 RPL38P63173 70 aaKnown RBP11.87□□□□□ -0.51
SHANK2-201ENST00000338508 PSRC1Q6PGN9 363 aaPredicted RBP11.87□□□□□ -0.51
SHANK2-201ENST00000338508 ZNF540Q8NDQ6 660 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 OR52K1Q8NGK4 314 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 COPS4Q9BT78 406 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 ASF1AQ9Y294 204 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 GMPPBQ9Y5P6 360 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 NEDD8-MDP1E9PL57 170 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 LINC00032P0C843 101 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 CD44P16070 742 aaKnown RBP11.86□□□□□ -0.51
SHANK2-201ENST00000338508 MAGP20916 626 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 KCNA5P22460 613 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 ATXN1P54253 815 aaKnown RBP11.86□□□□□ -0.51
SHANK2-201ENST00000338508 PPIDQ08752 370 aaKnown RBP11.86□□□□□ -0.51
SHANK2-201ENST00000338508 TRIM40Q6P9F5 258 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 ZNF571Q7Z3V5 609 aaPredicted RBP11.86□□□□□ -0.51
SHANK2-201ENST00000338508 TEX47Q8TBZ9 253 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 HELQQ8TDG4 1101 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 MCMBPQ9BTE3 642 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 C1orf50Q9BV19 199 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 ELOVL4Q9GZR5 314 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 ATAD3AQ9NVI7 634 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 LAMC1P11047 1609 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 E5RJQ4 531 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 PROSCO94903 275 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 PDX1P52945 283 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 ACVR2BQ13705 512 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 PTPN20Q4JDL3 420 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 CXorf57Q6NSI4 855 aaKnown RBP11.86□□□□□ -0.51
SHANK2-201ENST00000338508 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.86□□□□□ -0.51
SHANK2-201ENST00000338508 ARHGEF19Q8IW93 802 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 ZNF433Q8N7K0 673 aaPredicted RBP11.86□□□□□ -0.51
SHANK2-201ENST00000338508 MAB21L3Q8N8X9 362 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 PSMA8Q8TAA3 256 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 C9orf16Q9BUW7 83 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 IDI2Q9BXS1 227 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 IKZF2Q9UKS7 526 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 VPS4AQ9UN37 437 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 MYPNQ86TC9 1320 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 A0A087X0B3 334 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 SEPT4O43236 478 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 PGK1P00558 417 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 SERPINE1P05121 402 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 PTPN4P29074 926 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 C15orf59Q2T9L4 293 aaPredicted RBP11.86□□□□□ -0.51
SHANK2-201ENST00000338508 WSCD1Q658N2 575 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 FAM151BQ6UXP7 276 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 C8orf59Q8N0T1 100 aaPredicted RBP11.86□□□□□ -0.51
SHANK2-201ENST00000338508 CFAP52Q8N1V2 620 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 CHST4Q8NCG5 386 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 AGBL3Q8NEM8 1001 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 FATE1Q969F0 183 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 FCRL4Q96PJ5 515 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 SEMA4AQ9H3S1 761 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 POLLQ9UGP5 575 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 HES2Q9Y543 173 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 TNS3Q68CZ2 1445 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 CDK12Q9NYV4 1490 aaPredicted RBP11.86□□□□□ -0.51
SHANK2-201ENST00000338508 URADA6NGE7 173 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 RECQL4O94761 1208 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 PIGNO95427 931 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 SERPINA3P01011 423 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 ZSCAN5DPP0CG00 497 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 NCK1P16333 377 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 UGT1A5P35504 534 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 SCNN1GP51170 649 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 SV2AQ7L0J3 742 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 TXNRD3Q86VQ6 643 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 PRSS58Q8IYP2 241 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 OXNAD1Q96HP4 312 aaPredicted RBP11.86□□□□□ -0.51
SHANK2-201ENST00000338508 THAP1Q9NVV9 213 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 DNPEPQ9ULA0 475 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 NDRG2Q9UN36 371 aaKnown RBP11.86□□□□□ -0.51
SHANK2-201ENST00000338508 ARHGEF5Q12774 1597 aa11.86□□□□□ -0.51
SHANK2-201ENST00000338508 SLC25A14O95258 325 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms