RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 KLHL35Q6PF15 583 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 POMGNT2Q8NAT1 580 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 SCN3BQ9NY72 215 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 SHPRHQ149N8 1683 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 LTBP3Q9NS15 1303 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 C4BPAP04003 597 aaKnown RBP13.61□□□□□ -0.23
RFFL-201ENST00000315249 GLI1P08151 1106 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 GAD2Q05329 585 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 CSTF3Q12996 717 aaKnown RBP13.61□□□□□ -0.23
RFFL-201ENST00000315249 GRB14Q14449 540 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 XKR6Q5GH73 641 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 PAPD7Q5XG87 772 aaKnown RBP13.61□□□□□ -0.23
RFFL-201ENST00000315249 C16orf87Q6PH81 154 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 PLEKHM3Q6ZWE6 761 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 ZNF670Q9BS34 389 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 CHURC1-FNTBB4DL54 471 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 QSOX1O00391 747 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 ALBP02768 609 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 EPORP19235 508 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 ATP6V1B2P21281 511 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 DHPSP49366 369 aaPredicted RBP13.61□□□□□ -0.23
RFFL-201ENST00000315249 DGKGP49619 791 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 GRM3Q14832 879 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 TEX9Q8N6V9 391 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 SHC3Q92529 594 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 CPXM1Q96SM3 734 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 PRDM16Q9HAZ2 1276 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 ARHGAP28Q9P2N2 729 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 ANKRD6Q9Y2G4 727 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 OR10H1Q9Y4A9 318 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 MICAL3Q7RTP6 2002 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 KCPQ6ZWJ8 1503 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 CYP1A2P05177 515 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 NTSP30990 170 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 TMED1Q13445 227 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 GNA13Q14344 377 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 UAP1L1Q3KQV9 507 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 C16orf46Q6P387 395 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 IL12RB2Q99665 862 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 LPIN3Q9BQK8 851 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 GTPBP2Q9BX10 602 aaKnown RBP13.61□□□□□ -0.23
RFFL-201ENST00000315249 SLIT2O94813 1529 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 FAM45BPQ6NSW5 357 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 PHF13Q86YI8 300 aaPredicted RBP13.61□□□□□ -0.23
RFFL-201ENST00000315249 JOSD2Q8TAC2 188 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 FAM45AQ8TCE6 357 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 AGO3Q9H9G7 860 aaKnown RBP13.61□□□□□ -0.23
RFFL-201ENST00000315249 ELOVL2Q9NXB9 296 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 RHPN2P1A8MT19 583 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 TPP1O14773 563 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 GRK2P25098 689 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 PIK3CGP48736 1102 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 PURAQ00577 322 aaKnown RBP13.61□□□□□ -0.23
RFFL-201ENST00000315249 ZNHIT3Q15649 155 aaPredicted RBP13.61□□□□□ -0.23
RFFL-201ENST00000315249 FNBP1LQ5T0N5 605 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 SH3RF1Q7Z6J0 888 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 ABTB1Q969K4 478 aaPredicted RBP13.61□□□□□ -0.23
RFFL-201ENST00000315249 COPS8Q99627 209 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 FGFBP2Q9BYJ0 223 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 ABCB8Q9NUT2 735 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 GMEB2Q9UKD1 530 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.61□□□□□ -0.23
RFFL-201ENST00000315249 DNM1LO00429 736 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 SGTAO43765 313 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 PRNPP04156 253 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 FAAP100Q0VG06 881 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 TRIP10Q15642 601 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 SH3D19Q5HYK7 790 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 HID1Q8IV36 788 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 ATL1Q8WXF7 558 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 FIG4Q92562 907 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 QRFPRQ96P65 431 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 KCTD14Q9BQ13 255 aaPredicted RBP13.6□□□□□ -0.23
RFFL-201ENST00000315249 SNX10Q9Y5X0 201 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 GCATO75600 419 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 KRT33AO76009 404 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 OR6A2O95222 327 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 CNPP09543 421 aaKnown RBP13.6□□□□□ -0.23
RFFL-201ENST00000315249 ZNF23P17027 643 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 CDK18Q07002 472 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 FUT2Q10981 343 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 LRRC55Q6ZSA7 311 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 STAG3L4Q8TBR4 150 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 ANKRD49Q8WVL7 239 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 OSBPL10Q9BXB5 764 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 SLC12A4Q9UP95 1085 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 PAPSS1O43252 624 aaPredicted RBP13.6□□□□□ -0.23
RFFL-201ENST00000315249 TIGD5Q53EQ6 642 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 DNAJB7Q7Z6W7 309 aaPredicted RBP13.6□□□□□ -0.23
RFFL-201ENST00000315249 LRRC49Q8IUZ0 686 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 TSTD1Q8NFU3 115 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 LNX1Q8TBB1 728 aaPredicted RBP13.6□□□□□ -0.23
RFFL-201ENST00000315249 STXBP5LQ9Y2K9 1186 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 COX7A2P14406 83 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 SLC10A6Q3KNW5 377 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 HYIQ5T013 277 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 ZCCHC23Q6ZST2 131 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 MAGEB18Q96M61 343 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 SIRPGQ9P1W8 387 aa13.6□□□□□ -0.23
RFFL-201ENST00000315249 CCDC189A1A4V9 331 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms