RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 ATICP31939 592 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 ARL2P36404 184 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 HK2P52789 917 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 MRPS15P82914 257 aaKnown RBP13.17□□□□□ -0.3
TRIM35-201ENST00000305364 PPIL2Q13356 520 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 CAPRIN1Q14444 709 aaKnown RBP13.17□□□□□ -0.3
TRIM35-201ENST00000305364 TAF12Q16514 161 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 ARMCX2Q7L311 632 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 PLD3Q8IV08 490 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 ZNF567Q8N184 647 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 SLC10A4Q96EP9 437 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 FBXL20Q96IG2 436 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 BDH2Q9BUT1 245 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 ATXN3LQ9H3M9 355 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 PLEKHA5Q9HAU0 1116 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 TBC1D13Q9NVG8 400 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 DSEQ9UL01 958 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 OAZ3Q9UMX2 235 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 ATAD5Q96QE3 1844 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 YDJCA8MPS7 323 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 EI24O14681 340 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 MDM4O15151 490 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 TPD52L2O43399 206 aaKnown RBP13.16□□□□□ -0.3
TRIM35-201ENST00000305364 ATP6V1B2P21281 511 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 TSPY1Q01534 308 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 CDH17Q12864 832 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 CCDC142Q17RM4 750 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 GPR180Q86V85 440 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 CCDC185Q8N715 623 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 GIPC2Q8TF65 315 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 CAPSLQ8WWF8 208 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 CCDC126Q96EE4 140 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 MAGEB5Q9BZ81 275 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 CDT1Q9H211 546 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 RBM47A0AV96 593 aaKnown RBP13.16□□□□□ -0.3
TRIM35-201ENST00000305364 H0Y626 953 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 TRIM16O95361 564 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 KRT8P05787 483 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 CYP2C8P10632 490 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 ATP5F1P24539 256 aaPredicted RBP13.16□□□□□ -0.3
TRIM35-201ENST00000305364 TMTC4Q5T4D3 741 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 PARP8Q8N3A8 854 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 OR9I1Q8NGQ6 314 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 CELF6Q96J87 481 aaKnown RBP13.16□□□□□ -0.3
TRIM35-201ENST00000305364 SPATA33Q96N06 139 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 YIPF2Q9BWQ6 316 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 RNF19AQ9NV58 838 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 SUCOQ9UBS9 1254 aaKnown RBP13.16□□□□□ -0.3
TRIM35-201ENST00000305364 STYXL1Q9Y6J8 313 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 TOR1BO14657 336 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 HERC3Q15034 1050 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 IMPG1Q17R60 797 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 PRMT7Q9NVM4 692 aaPredicted RBP13.16□□□□□ -0.3
TRIM35-201ENST00000305364 FNDC3AQ9Y2H6 1198 aaKnown RBP13.16□□□□□ -0.3
TRIM35-201ENST00000305364 RNF11Q9Y3C5 154 aa13.16□□□□□ -0.3
TRIM35-201ENST00000305364 PRSS51A0A1B0GVH4 220 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 TCRBV5S1A1TA0A578 114 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 HOXC6P09630 235 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 NFKB1P19838 968 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 GLDCP23378 1020 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 EPHX2P34913 555 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 RXRGP48443 463 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 CD151P48509 253 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 NPY2RP49146 381 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 ACADVLP49748 655 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 KPNA1P52294 538 aaPredicted RBP13.15□□□□□ -0.3
TRIM35-201ENST00000305364 OXCT1P55809 520 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 RAB10P61026 200 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 SLC10A2Q12908 348 aaPredicted RBP13.15□□□□□ -0.3
TRIM35-201ENST00000305364 C6orf10Q5SRN2 563 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 ANAPC2Q9UJX6 822 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 TMA7Q9Y2S6 64 aaKnown RBP13.15□□□□□ -0.3
TRIM35-201ENST00000305364 HES2Q9Y543 173 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 SMCHD1A6NHR9 2005 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 SLC22A2O15244 555 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 BMP10O95393 424 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 PCNAP12004 261 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 HOXD12P35452 270 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 APOFQ13790 326 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 RAB39AQ14964 217 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 Q6ZNX1 250 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 CHERPQ8IWX8 916 aaKnown RBP13.15□□□□□ -0.3
TRIM35-201ENST00000305364 BEST2Q8NFU1 509 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 MAGED4Q96JG8 741 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 IL22Q9GZX6 179 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 RHOJQ9H4E5 214 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 SOX17Q9H6I2 414 aaPredicted RBP13.15□□□□□ -0.3
TRIM35-201ENST00000305364 SMPD3Q9NY59 655 aaPredicted RBP13.15□□□□□ -0.3
TRIM35-201ENST00000305364 BAG5Q9UL15 447 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 MRPL42Q9Y6G3 142 aaKnown RBP13.15□□□□□ -0.3
TRIM35-201ENST00000305364 SOCS2O14508 198 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 SPTLC1O15269 473 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 B4GALT4O60513 344 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 HUS1O60921 280 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 CDH13P55290 713 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 CNTN2Q02246 1040 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 NSUN2Q08J23 767 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRIM35-201ENST00000305364 LAMC2Q13753 1193 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 MOGQ16653 247 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 CLEC6AQ6EIG7 209 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms