RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 STK32CQ86UX6 486 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 SYT12Q8IV01 421 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 ULK2Q8IYT8 1036 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 SNRNP27Q8WVK2 155 aaKnown RBP16.5■□□□□ 0.23
BRD3-201ENST00000303407 SNX27Q96L92 541 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 C2orf49Q9BVC5 232 aaPredicted RBP16.5■□□□□ 0.23
BRD3-201ENST00000303407 AHSPQ9NZD4 102 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 C2orf71A6NGG8 1288 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 BTBD19C9JJ37 291 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 RASSF9O75901 435 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 MLYCDO95822 493 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 ADRA1BP35368 520 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 POLR2LP62875 67 aaKnown RBP16.5■□□□□ 0.23
BRD3-201ENST00000303407 PABPC1LQ4VXU2 614 aaKnown RBP16.5■□□□□ 0.23
BRD3-201ENST00000303407 OTOP3Q7RTS5 596 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 SDCBP2Q9H190 292 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 RHBDL2Q9NX52 303 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 ALDH1A2O94788 518 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 SNUPNO95149 360 aaKnown RBP16.49■□□□□ 0.23
BRD3-201ENST00000303407 CCDC142Q17RM4 750 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 TMEM109Q9BVC6 243 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 SPAG4Q9NPE6 437 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 PAPOLBQ9NRJ5 636 aaKnown RBP16.49■□□□□ 0.23
BRD3-201ENST00000303407 ANAPC2Q9UJX6 822 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 CD3EAPO15446 510 aaKnown RBP16.49■□□□□ 0.23
BRD3-201ENST00000303407 TREHO43280 583 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 DHDDSQ86SQ9 333 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 DAW1Q8N136 415 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 ZNF276Q8N554 614 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 TLCD1Q96CP7 247 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 SHISA4Q96DD7 197 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 KLHL5Q96PQ7 755 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.49■□□□□ 0.231e-6■■■■□ 23.9
BRD3-201ENST00000303407 TRPC4Q9UBN4 977 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 DPP7Q9UHL4 492 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 RGPD2P0DJD1 1756 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 CHD2O14647 1828 aaKnown RBP16.49■□□□□ 0.23
BRD3-201ENST00000303407 SNTNA6NMZ2 147 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 PIK3R1P27986 724 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 HPCAL1P37235 193 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 USP4Q13107 963 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 FNDC3BQ53EP0 1204 aaKnown RBP16.49■□□□□ 0.23
BRD3-201ENST00000303407 PIWIL4Q7Z3Z4 852 aaKnown RBP16.49■□□□□ 0.23
BRD3-201ENST00000303407 OR52K2Q8NGK3 314 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 GLOD4Q9HC38 313 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 KRT84Q9NSB2 600 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 LGALS13Q9UHV8 139 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 TRIM38O00635 465 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 MDM4O15151 490 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 IMPDH2P12268 514 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 WNT3AP56704 352 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 POTEHQ6S545 545 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 GRIN3AQ8TCU5 1115 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 HDAC10Q969S8 669 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 EXOC2Q96KP1 924 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 FBXO5Q9UKT4 447 aa16.49■□□□□ 0.23
BRD3-201ENST00000303407 HBS1LQ9Y450 684 aaKnown RBP16.49■□□□□ 0.23
BRD3-201ENST00000303407 SH3BGRLO75368 114 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 ZNF280AP59817 542 aaPredicted RBP16.48■□□□□ 0.23
BRD3-201ENST00000303407 OR4L1Q8NH43 312 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 RCN3Q96D15 328 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 RIBC2Q9H4K1 309 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 LRP6O75581 1613 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 ATG7O95352 703 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 DLGAP3O95886 979 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 GRIA3P42263 894 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 PLCL1Q15111 1095 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 NEDD8Q15843 81 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 PHF21AQ96BD5 680 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 C12orf65Q9H3J6 166 aaKnown RBP16.48■□□□□ 0.23
BRD3-201ENST00000303407 ADPRHL2Q9NX46 363 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 TRAV19A0A0A6YYK7 116 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 COX7A2P14406 83 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 PSMB9P28065 219 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 SETMARQ53H47 684 aaPredicted RBP16.48■□□□□ 0.23
BRD3-201ENST00000303407 TEX44Q53QW1 395 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 DOK6Q6PKX4 331 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 ZNF621Q6ZSS3 439 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 DHRSXQ8N5I4 330 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 ZNF558Q96NG5 402 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 NTPCRQ9BSD7 190 aaKnown RBP16.48■□□□□ 0.23
BRD3-201ENST00000303407 TRIM17Q9Y577 477 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 PRR5-ARHGAP8B1AHC4 643 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 ANXA5P08758 320 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 PRKAR2AP13861 404 aaKnown RBP16.48■□□□□ 0.23
BRD3-201ENST00000303407 FKBP1BP68106 108 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 ARHGAP8P85298 464 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 CDK18Q07002 472 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 PTPRNQ16849 979 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 UTP15Q8TED0 518 aaKnown RBP16.48■□□□□ 0.23
BRD3-201ENST00000303407 ZNF516Q92618 1163 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 NFKBIZQ9BYH8 718 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 WFS1O76024 890 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 CHN2P52757 468 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 SFSWAPQ12872 951 aaKnown RBP16.48■□□□□ 0.23
BRD3-201ENST00000303407 FAM110CQ1W6H9 321 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 PYROXD2Q8N2H3 581 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 ERLEC1Q96DZ1 483 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 TM6SF2Q9BZW4 377 aa16.48■□□□□ 0.23
BRD3-201ENST00000303407 GBA3Q9H227 469 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms