RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 SCNN1BP51168 640 aa14.73□□□□□ -0.05
SMG8-201ENST00000300917 CSHL1Q14406 222 aa14.73□□□□□ -0.05
SMG8-201ENST00000300917 USP41Q3LFD5 358 aa14.73□□□□□ -0.05
SMG8-201ENST00000300917 TSNARE1Q96NA8 513 aa14.73□□□□□ -0.05
SMG8-201ENST00000300917 RNF38Q9H0F5 515 aa14.73□□□□□ -0.05
SMG8-201ENST00000300917 LRMDAQ9H2I8 198 aa14.73□□□□□ -0.05
SMG8-201ENST00000300917 ELAC1Q9H777 363 aaKnown RBP14.73□□□□□ -0.05
SMG8-201ENST00000300917 LOC100653049A0A140TA62 436 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 H7C4K7 107 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 BIRC5O15392 142 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 ZMPSTE24O75844 475 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 KRT34O76011 436 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 TGDSO95455 350 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 KLKB1P03952 638 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 ACRP10323 421 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 NAGLUP54802 743 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 SLC12A2P55011 1212 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 SIRPB2Q5JXA9 342 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 AFMIDQ63HM1 303 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 KDELC1Q6UW63 502 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 FAM13CQ8NE31 585 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 SH3RF2Q8TEC5 729 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 EXT2Q93063 718 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 CLPTM1LQ96KA5 538 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 SORT1Q99523 831 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 ACE2Q9BYF1 805 aaPredicted RBP14.72□□□□□ -0.05
SMG8-201ENST00000300917 WWP1Q9H0M0 922 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 RHOJQ9H4E5 214 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 NYNRINQ9P2P1 1898 aaKnown RBP14.72□□□□□ -0.05
SMG8-201ENST00000300917 GOLGA8CPA6NN73 597 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 B2RBV5 119 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 E9PBE3 544 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 KLHL41O60662 606 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 MMP2P08253 660 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 SLC35E2BP0CK96 405 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 ARCN1P48444 511 aaKnown RBP14.72□□□□□ -0.05
SMG8-201ENST00000300917 DEFB103AP81534 67 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 NAB1Q13506 487 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 LBRQ14739 615 aaKnown RBP14.72□□□□□ -0.05
SMG8-201ENST00000300917 CFAP157Q5JU67 520 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 MAVSQ7Z434 540 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 RYBPQ8N488 228 aaPredicted RBP14.72□□□□□ -0.05
SMG8-201ENST00000300917 APBB2Q92870 758 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 MCUR1Q96AQ8 359 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 IFT43Q96FT9 208 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 IMP4Q96G21 291 aaKnown RBP14.72□□□□□ -0.05
SMG8-201ENST00000300917 CLSTN3Q9BQT9 956 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 CADM1Q9BY67 442 aaKnown RBP14.72□□□□□ -0.05
SMG8-201ENST00000300917 XPR1Q9UBH6 696 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 PRRG1O14668 218 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 PSMD3O43242 534 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 CACNG3O60359 315 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 MPSTP25325 297 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 RGRP47804 291 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 HARS2P49590 506 aaKnown RBP14.72□□□□□ -0.05
SMG8-201ENST00000300917 SESN3P58005 492 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 ABCE1P61221 599 aaKnown RBP14.72□□□□□ -0.05
SMG8-201ENST00000300917 PRAMEP78395 509 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 ACCSLQ4AC99 568 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 FSTL5Q8N475 847 aaPredicted RBP14.72□□□□□ -0.05
SMG8-201ENST00000300917 TBATAQ96M53 351 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 GATA5Q9BWX5 397 aaPredicted RBP14.72□□□□□ -0.05
SMG8-201ENST00000300917 MRPL9Q9BYD2 267 aaKnown RBP14.72□□□□□ -0.05
SMG8-201ENST00000300917 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.72□□□□□ -0.05
SMG8-201ENST00000300917 KCNK4Q9NYG8 393 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 MARCH4Q9P2E8 410 aaPredicted RBP14.72□□□□□ -0.05
SMG8-201ENST00000300917 DNMT3LQ9UJW3 386 aa14.72□□□□□ -0.05
SMG8-201ENST00000300917 G3V2L1 256 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 PITPNM1O00562 1244 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 GM2AP17900 193 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 CORO1AP31146 461 aaKnown RBP14.71□□□□□ -0.05
SMG8-201ENST00000300917 NDST2P52849 883 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 ELAVL2Q12926 359 aaKnown RBP14.71□□□□□ -0.05
SMG8-201ENST00000300917 DLG1Q12959 904 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 SNX30Q5VWJ9 437 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 OR13C4Q8NGS5 318 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 ZNF398Q8TD17 642 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 NAT14Q8WUY8 206 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 SLC22A12Q96S37 553 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 OSBPL1AQ9BXW6 950 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 WDR55Q9H6Y2 383 aaPredicted RBP14.71□□□□□ -0.05
SMG8-201ENST00000300917 OLA1Q9NTK5 396 aaKnown RBP14.71□□□□□ -0.05
SMG8-201ENST00000300917 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.71□□□□□ -0.05
SMG8-201ENST00000300917 UNC80Q8N2C7 3258 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 CHUKO15111 745 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 TBC1D4O60343 1298 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 RPSAP08865 295 aaKnown RBP14.71□□□□□ -0.05
SMG8-201ENST00000300917 STMN1P16949 149 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 PTPN4P29074 926 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 SERINC3Q13530 473 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 POTEHQ6S545 545 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 EFCAB3Q8N7B9 438 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 IGSF21Q96ID5 467 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 RAB3IPQ96QF0 476 aaPredicted RBP14.71□□□□□ -0.05
SMG8-201ENST00000300917 GPR22Q99680 433 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 TMEM39AQ9NV64 488 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 TAS2R1Q9NYW7 299 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 PLK2Q9NYY3 685 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 ACOT9Q9Y305 439 aa14.71□□□□□ -0.05
SMG8-201ENST00000300917 ACSL4O60488 711 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms