RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 HOXD10P28358 340 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 SOX11P35716 441 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 ABCG1P45844 678 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 ALDH7A1P49419 539 aaKnown RBP8.87□□□□□ -0.99
VAPB-201ENST00000265619 CETN1Q12798 172 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 XKR9Q5GH70 373 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 TJAP1Q5JTD0 557 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 FAM102BQ5T8I3 360 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 LAYNQ6UX15 382 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 NEK10Q6ZWH5 1172 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 CMC1Q7Z7K0 106 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 CADM2Q8N3J6 435 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 OR2T34Q8NGX1 318 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 DLG3Q92796 817 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 RRAGCQ9HB90 399 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 TRIM39Q9HCM9 518 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 BRCA2P51587 3418 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 GOLGA8CPA6NN73 597 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 H0YJX3 145 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 H3BUI4 141 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 SCO1O75880 301 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 SEC14L2O76054 403 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 SNAP29O95721 258 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 TFE3P19532 575 aaPredicted RBP8.86□□□□□ -0.99
VAPB-201ENST00000265619 ATP6V1B2P21281 511 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 HARS2P49590 506 aaKnown RBP8.86□□□□□ -0.99
VAPB-201ENST00000265619 SLC26A2P50443 739 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 ATP6V0D1P61421 351 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 GPLD1P80108 840 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 RHDQ02161 417 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 ZNF354CQ86Y25 554 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 NDNFQ8TB73 568 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 HMGCLL1Q8TB92 370 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 SLC10A4Q96EP9 437 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 TRIM8Q9BZR9 551 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 RMND5AQ9H871 391 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 PGAP2Q9UHJ9 254 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 ENPP5Q9UJA9 477 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 VPS28Q9UK41 221 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 SLC15A5A6NIM6 579 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 hCG_2039718K7EN88 272 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 AP3D1O14617 1153 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 SLC26A4O43511 780 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 USP12O75317 370 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 PARNO95453 639 aaKnown RBP8.86□□□□□ -0.99
VAPB-201ENST00000265619 MT-ND1P03886 318 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 NR3C2P08235 984 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 ART3Q13508 389 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 NPTX1Q15818 432 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 TKFCQ3LXA3 575 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 DCP2Q8IU60 420 aaKnown RBP8.86□□□□□ -0.99
VAPB-201ENST00000265619 XXYLT1Q8NBI6 393 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 CLEC4DQ8WXI8 215 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 FAF2Q96CS3 445 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 HDAC11Q96DB2 347 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 ATXN7L3BQ96GX2 97 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 LRCH3Q96II8 777 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 TXNDC15Q96J42 360 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 FUNDC2Q9BWH2 189 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 BTBD2Q9BX70 525 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 DGCR6LQ9BY27 220 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 COPG2Q9UBF2 871 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 MICAL3Q7RTP6 2002 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 TMEM191CA6NGB0 347 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 TMEM233B4DJY2 109 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 SNPHO15079 494 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 IDH3BO43837 385 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 B4GALT4O60513 344 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 NDUFS2O75306 463 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 NADKO95544 446 aaPredicted RBP8.86□□□□□ -0.99
VAPB-201ENST00000265619 CPNE6O95741 557 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 UGT2B4P06133 528 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 FSHRP23945 695 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 WEE1P30291 646 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 CD68P34810 354 aaPredicted RBP8.86□□□□□ -0.99
VAPB-201ENST00000265619 SHMT2P34897 504 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 LEPRP48357 1165 aaKnown RBP8.86□□□□□ -0.99
VAPB-201ENST00000265619 TRIM25Q14258 630 aaKnown RBP8.86□□□□□ -0.99
VAPB-201ENST00000265619 TBPL2Q6SJ96 375 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 SV2AQ7L0J3 742 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 SLCO6A1Q86UG4 719 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 CELF2-AS1Q8N7Q2 184 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 TDRD5Q8NAT2 981 aaKnown RBP8.86□□□□□ -0.99
VAPB-201ENST00000265619 LEMD2Q8NC56 503 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 ASB9Q96DX5 294 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 CITED4Q96RK1 184 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 COQ7Q99807 217 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 TEX13BQ9BXU2 312 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 DHX33Q9H6R0 707 aaKnown RBP8.86□□□□□ -0.99
VAPB-201ENST00000265619 RAB6BQ9NRW1 208 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 PCDHGC3Q9UN70 934 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 AGTPBP1Q9UPW5 1226 aa8.86□□□□□ -0.99
VAPB-201ENST00000265619 ARIH1Q9Y4X5 557 aaPredicted RBP8.86□□□□□ -0.99
VAPB-201ENST00000265619 TCRBV3S1A0A5B6 114 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 H0Y858 1186 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 TRIM38O00635 465 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 MFN2O95140 757 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 HTR1AP08908 422 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 VDRP11473 427 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 EEF1B2P24534 225 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms