RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 SPAARA0A1B0GVQ0 90 aa23.27■■□□□ 1.32
LSM4-201ENST00000252816 SLC31A1O15431 190 aa23.27■■□□□ 1.32
LSM4-201ENST00000252816 SPINT1O43278 529 aa23.27■■□□□ 1.32
LSM4-201ENST00000252816 CD48P09326 243 aa23.27■■□□□ 1.32
LSM4-201ENST00000252816 IL4RP24394 825 aa23.27■■□□□ 1.32
LSM4-201ENST00000252816 ARSEP51690 589 aa23.27■■□□□ 1.32
LSM4-201ENST00000252816 TAS2R40P59535 323 aa23.27■■□□□ 1.32
LSM4-201ENST00000252816 ATP13A4Q4VNC1 1196 aa23.27■■□□□ 1.32
LSM4-201ENST00000252816 TMEM259Q4ZIN3 620 aa23.27■■□□□ 1.32
LSM4-201ENST00000252816 GDPD4Q6W3E5 623 aa23.27■■□□□ 1.32
LSM4-201ENST00000252816 NAXDQ8IW45 347 aa23.27■■□□□ 1.32
LSM4-201ENST00000252816 LZTR1Q8N653 840 aa23.27■■□□□ 1.32
LSM4-201ENST00000252816 TC2NQ8N9U0 490 aa23.27■■□□□ 1.32
LSM4-201ENST00000252816 TMEM145Q8NBT3 493 aa23.27■■□□□ 1.32
LSM4-201ENST00000252816 MYOCQ99972 504 aa23.27■■□□□ 1.32
LSM4-201ENST00000252816 PRAMEF26H0Y7S4 382 aa23.26■■□□□ 1.31
LSM4-201ENST00000252816 TLR4O00206 839 aa23.26■■□□□ 1.31
LSM4-201ENST00000252816 AP1G1O43747 822 aa23.26■■□□□ 1.31
LSM4-201ENST00000252816 PMLP29590 882 aa23.26■■□□□ 1.31
LSM4-201ENST00000252816 RGRP47804 291 aa23.26■■□□□ 1.31
LSM4-201ENST00000252816 CDH6P55285 790 aa23.26■■□□□ 1.31
LSM4-201ENST00000252816 RAD51Q06609 339 aa23.26■■□□□ 1.31
LSM4-201ENST00000252816 MMRN1Q13201 1228 aa23.26■■□□□ 1.31
LSM4-201ENST00000252816 FGL2Q14314 439 aa23.26■■□□□ 1.31
LSM4-201ENST00000252816 TMCO3Q6UWJ1 677 aa23.26■■□□□ 1.31
LSM4-201ENST00000252816 DBX2Q6ZNG2 339 aa23.26■■□□□ 1.31
LSM4-201ENST00000252816 GAS2L3Q86XJ1 694 aa23.26■■□□□ 1.31
LSM4-201ENST00000252816 MFSD2AQ8NA29 543 aa23.26■■□□□ 1.31
LSM4-201ENST00000252816 FAM71BQ8TC56 605 aa23.26■■□□□ 1.31
LSM4-201ENST00000252816 SKA1Q96BD8 255 aa23.26■■□□□ 1.31
LSM4-201ENST00000252816 SP110Q9HB58 689 aa23.26■■□□□ 1.31
LSM4-201ENST00000252816 FZD3Q9NPG1 666 aa23.26■■□□□ 1.31
LSM4-201ENST00000252816 IPO11Q9UI26 975 aaKnown RBP23.26■■□□□ 1.31
LSM4-201ENST00000252816 GGT7Q9UJ14 662 aa23.26■■□□□ 1.31
LSM4-201ENST00000252816 ITM2BQ9Y287 266 aa23.26■■□□□ 1.31
LSM4-201ENST00000252816 PCDHGB2Q9Y5G2 931 aa23.26■■□□□ 1.31
LSM4-201ENST00000252816 CBFA2T3O75081 653 aa23.25■■□□□ 1.31
LSM4-201ENST00000252816 PALMO75781 387 aa23.25■■□□□ 1.31
LSM4-201ENST00000252816 GJC1P36383 396 aa23.25■■□□□ 1.31
LSM4-201ENST00000252816 NXPH1P58417 271 aa23.25■■□□□ 1.31
LSM4-201ENST00000252816 IL9RQ01113 521 aa23.25■■□□□ 1.31
LSM4-201ENST00000252816 IL10RBQ08334 325 aa23.25■■□□□ 1.31
LSM4-201ENST00000252816 KRT81Q14533 505 aa23.25■■□□□ 1.31
LSM4-201ENST00000252816 STAT4Q14765 748 aa23.25■■□□□ 1.31
LSM4-201ENST00000252816 HADHQ16836 314 aaKnown RBP23.25■■□□□ 1.31
LSM4-201ENST00000252816 SLC45A4Q5BKX6 768 aa23.25■■□□□ 1.31
LSM4-201ENST00000252816 LRRC73Q5JTD7 316 aa23.25■■□□□ 1.31
LSM4-201ENST00000252816 SPATS2Q86XZ4 545 aaKnown RBP23.25■■□□□ 1.31
LSM4-201ENST00000252816 TSEN2Q8NCE0 465 aaKnown RBP23.25■■□□□ 1.31
LSM4-201ENST00000252816 SLC35G2Q8TBE7 412 aa23.25■■□□□ 1.31
LSM4-201ENST00000252816 RAB7BQ96AH8 199 aa23.25■■□□□ 1.31
LSM4-201ENST00000252816 CPEB1Q9BZB8 566 aaKnown RBP23.25■■□□□ 1.31
LSM4-201ENST00000252816 A0A1B0GTQ1 180 aa23.24■■□□□ 1.31
LSM4-201ENST00000252816 AREL1O15033 823 aa23.24■■□□□ 1.31
LSM4-201ENST00000252816 PIGNO95427 931 aa23.24■■□□□ 1.31
LSM4-201ENST00000252816 CCT8P50990 548 aa23.24■■□□□ 1.31
LSM4-201ENST00000252816 RPS21P63220 83 aaKnown RBP23.24■■□□□ 1.31
LSM4-201ENST00000252816 SIM1P81133 766 aaPredicted RBP23.24■■□□□ 1.31
LSM4-201ENST00000252816 SHBQ15464 509 aa23.24■■□□□ 1.31
LSM4-201ENST00000252816 KIAA1161Q6NSJ0 714 aa23.24■■□□□ 1.31
LSM4-201ENST00000252816 SETD7Q8WTS6 366 aaKnown RBP23.24■■□□□ 1.31
LSM4-201ENST00000252816 FEM1CQ96JP0 617 aa23.24■■□□□ 1.31
LSM4-201ENST00000252816 ELF4Q99607 663 aaPredicted RBP23.24■■□□□ 1.31
LSM4-201ENST00000252816 GDF3Q9NR23 364 aa23.24■■□□□ 1.31
LSM4-201ENST00000252816 KLHL11Q9NVR0 708 aa23.24■■□□□ 1.31
LSM4-201ENST00000252816 RCOR3Q9P2K3 495 aaPredicted RBP23.24■■□□□ 1.31
LSM4-201ENST00000252816 DKK3Q9UBP4 350 aa23.24■■□□□ 1.31
LSM4-201ENST00000252816 PCOLCE2Q9UKZ9 415 aa23.24■■□□□ 1.31
LSM4-201ENST00000252816 BTBD3Q9Y2F9 522 aa23.24■■□□□ 1.31
LSM4-201ENST00000252816 TP53BP1Q12888 1972 aaPredicted RBP23.23■■□□□ 1.31
LSM4-201ENST00000252816 TRPM6Q9BX84 2022 aa23.23■■□□□ 1.31
LSM4-201ENST00000252816 TMEM110-MUSTN1A8MSY1 372 aa23.23■■□□□ 1.31
LSM4-201ENST00000252816 MUSKO15146 869 aa23.23■■□□□ 1.31
LSM4-201ENST00000252816 PCDHGA12O60330 932 aa23.23■■□□□ 1.31
LSM4-201ENST00000252816 BUB1BO60566 1050 aaPredicted RBP23.23■■□□□ 1.31
LSM4-201ENST00000252816 TIMP2P16035 220 aa23.23■■□□□ 1.31
LSM4-201ENST00000252816 ITIH2P19823 946 aa23.23■■□□□ 1.31
LSM4-201ENST00000252816 HNRNPA2B1P22626 353 aaKnown RBP23.23■■□□□ 1.31
LSM4-201ENST00000252816 MAN1A1P33908 653 aa23.23■■□□□ 1.31
LSM4-201ENST00000252816 ZNF75DP51815 510 aa23.23■■□□□ 1.31
LSM4-201ENST00000252816 DPYSL3Q14195 570 aa23.23■■□□□ 1.31
LSM4-201ENST00000252816 MESDQ14696 234 aa23.23■■□□□ 1.31
LSM4-201ENST00000252816 TTC7BQ86TV6 843 aa23.23■■□□□ 1.31
LSM4-201ENST00000252816 IQCHQ86VS3 1027 aa23.23■■□□□ 1.31
LSM4-201ENST00000252816 SLC17A9Q9BYT1 436 aa23.23■■□□□ 1.31
LSM4-201ENST00000252816 IGLON5A6NGN9 336 aa23.22■■□□□ 1.31
LSM4-201ENST00000252816 RAD51BO15315 384 aa23.22■■□□□ 1.31
LSM4-201ENST00000252816 TSPAN6O43657 245 aa23.22■■□□□ 1.31
LSM4-201ENST00000252816 DFNA5O60443 496 aa23.22■■□□□ 1.31
LSM4-201ENST00000252816 PEX11BO96011 259 aa23.22■■□□□ 1.31
LSM4-201ENST00000252816 AKT2P31751 481 aa23.22■■□□□ 1.31
LSM4-201ENST00000252816 CLDN2P57739 230 aa23.22■■□□□ 1.31
LSM4-201ENST00000252816 SLC10A7Q0GE19 358 aa23.22■■□□□ 1.31
LSM4-201ENST00000252816 OVGP1Q12889 678 aa23.22■■□□□ 1.31
LSM4-201ENST00000252816 RFTN1Q14699 578 aaPredicted RBP23.22■■□□□ 1.31
LSM4-201ENST00000252816 TRIP6Q15654 476 aaKnown RBP23.22■■□□□ 1.31
LSM4-201ENST00000252816 SRLQ86TD4 932 aa23.22■■□□□ 1.31
LSM4-201ENST00000252816 CINPQ9BW66 212 aaPredicted RBP23.22■■□□□ 1.31
LSM4-201ENST00000252816 SUV39H2Q9H5I1 410 aa23.22■■□□□ 1.31
LSM4-201ENST00000252816 LCMT1Q9UIC8 334 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms