RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 LRRC37AA6NMS7 1700 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 TRPC5OSA6NMA1 111 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 H3BMQ9 156 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 ARIH2O95376 493 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 FUCA1P04066 466 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 SNRPB2P08579 225 aaKnown RBP20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 CHRM3P20309 590 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 BAG6P46379 1132 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 KPNA1P52294 538 aaPredicted RBP20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 ADIGQ0VDE8 80 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 RAB39AQ14964 217 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 FAM83EQ2M2I3 478 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 NHSL2Q5HYW2 709 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 KCTD8Q6ZWB6 473 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 OTOP3Q7RTS5 596 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 CENPLQ8N0S6 344 aaPredicted RBP20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 BPIFB6Q8NFQ5 453 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 SLC2A14Q8TDB8 520 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 COG8Q96MW5 612 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 TNFSF13BQ9Y275 285 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 NCAM1P13591 858 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 STMN1P16949 149 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 PTPRAP18433 802 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 NSUN2Q08J23 767 aaKnown RBP eCLIP20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 FUT11Q495W5 492 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 CTU1Q7Z7A3 348 aaKnown RBP20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 ZC3HC1Q86WB0 502 aaKnown RBP20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 ZC3H7AQ8IWR0 971 aaKnown RBP20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 LZTR1Q8N653 840 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 PDZD8Q8NEN9 1154 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 SPATA22Q8NHS9 363 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 HIPK3Q9H422 1215 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 VPS45Q9NRW7 570 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 SUCOQ9UBS9 1254 aaKnown RBP20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 HACD1B0YJ81 288 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 ERCC2P18074 760 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 ARF4P18085 180 aaPredicted RBP20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 NDUFV1P49821 464 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 NANOGP8Q6NSW7 305 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 LYSMD3Q7Z3D4 306 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 TMEM135Q86UB9 458 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 IPMKQ8NFU5 416 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 TFAP2CQ92754 450 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 SEPHS2Q99611 448 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 RPF2Q9H7B2 306 aaKnown RBP20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 WARS2Q9UGM6 360 aaKnown RBP20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 FAM95CA0A1B0GW59 222 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 SLCO1B7G3V0H7 640 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 INPP4BO15327 924 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 NRP2O60462 931 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 PROZP22891 400 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 ATICP31939 592 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 CDH13P55290 713 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 CXCL9Q07325 125 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 PERM1Q5SV97 790 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 NIM1KQ8IY84 436 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 BORCS5Q969J3 196 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 ANKRD60Q9BZ19 345 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 TRIM17Q9Y577 477 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 NME7Q9Y5B8 376 aa20.27■□□□□ 0.84
PPP1R3F-201ENST00000055335 EI24O14681 340 aa20.27■□□□□ 0.83
PPP1R3F-201ENST00000055335 AP2A1O95782 977 aa20.27■□□□□ 0.83
PPP1R3F-201ENST00000055335 APOA4P06727 396 aa20.27■□□□□ 0.83
PPP1R3F-201ENST00000055335 CLCN2P51788 898 aa20.27■□□□□ 0.83
PPP1R3F-201ENST00000055335 MERTKQ12866 999 aa20.27■□□□□ 0.83
PPP1R3F-201ENST00000055335 CYP2A13Q16696 494 aa20.27■□□□□ 0.83
PPP1R3F-201ENST00000055335 VPS26BQ4G0F5 336 aa20.27■□□□□ 0.83
PPP1R3F-201ENST00000055335 GJC2Q5T442 439 aaPredicted RBP20.27■□□□□ 0.83
PPP1R3F-201ENST00000055335 GALNT18Q6P9A2 607 aa20.27■□□□□ 0.83
PPP1R3F-201ENST00000055335 SLC7A14Q8TBB6 771 aa20.27■□□□□ 0.83
PPP1R3F-201ENST00000055335 SPPL2BQ8TCT7 592 aa20.27■□□□□ 0.83
PPP1R3F-201ENST00000055335 C18orf25Q96B23 403 aaPredicted RBP20.27■□□□□ 0.83
PPP1R3F-201ENST00000055335 ZFYVE28Q9HCC9 887 aa20.27■□□□□ 0.83
PPP1R3F-201ENST00000055335 DSEQ9UL01 958 aa20.27■□□□□ 0.83
PPP1R3F-201ENST00000055335 MTHFD1P11586 935 aaKnown RBP20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 KCNA5P22460 613 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 HALP42357 657 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 BMXP51813 675 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 SAMD4BQ5PRF9 694 aaKnown RBP20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 ZNF618Q5T7W0 954 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 REPS2Q8NFH8 660 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 HM13Q8TCT9 377 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 HEXDCQ8WVB3 486 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 PTGDR2Q9Y5Y4 395 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 DGKBQ9Y6T7 804 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 CLDN5O00501 218 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 SUPT7LO94864 414 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 PGK1P00558 417 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 CES1P23141 567 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 GABRB3P28472 473 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 SNX16P57768 344 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 STX1BP61266 288 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 BFSP2Q13515 415 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 C1QTNF12Q5T7M4 302 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 SYPL2Q5VXT5 272 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 DCDC5Q6ZRR9 648 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 CAMK1DQ8IU85 385 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 STYXQ8WUJ0 223 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 VPS50Q96JG6 964 aa20.26■□□□□ 0.83
PPP1R3F-201ENST00000055335 ADNPQ9H2P0 1102 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms