RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Mvb12bQ6KAU4 317 aa13.5□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Fam120bQ6RI63 786 aa13.5□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Zmpste24Q80W54 475 aa13.5□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Znf473Q8BI67 892 aa13.5□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Zswim3Q8CFL8 695 aa13.5□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Nol6Q8R5K4 1152 aaKnown RBP13.5□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Zfp566Q8VCI1 386 aa13.5□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Lrrc40Q9CRC8 602 aa13.5□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Prpsap1Q9D0M1 356 aa13.5□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Cldn22Q9D7U6 220 aa13.5□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Tlr9Q9EQU3 1032 aa13.5□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Tubb3Q9ERD7 450 aa13.5□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Gucy1a3Q9ERL9 691 aa13.5□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Zc3h7aE9PWW6 970 aaKnown RBP13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Vmn1r76F8VQ63 324 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Grem1O70326 184 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Cxcr2P35343 359 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Aldh3a1P47739 453 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Gabrb3P63080 473 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 HmgcrQ01237 887 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 GaltQ03249 379 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Arid5aQ3U108 590 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Agap2Q3UHD9 1186 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Trcg1Q58Y74 825 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Stxbp5lQ5DQR4 1185 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 StyxQ60969 223 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Nlrp9cQ66X01 1004 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Olfr1062Q7TR71 315 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 ToporsQ80Z37 1033 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Ldlrap1Q8C142 308 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Nlrp10Q8CCN1 673 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Ddx18Q8K363 660 aaKnown RBP13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 GrpQ8R1I2 146 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Ppp6r2Q8R3Q2 923 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Myoz3Q8R4E4 245 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Eef1akmt2Q9D853 244 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Serpinb9bQ9DAV6 377 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Akr1c12Q9JLI0 323 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 DgkeQ9R1C6 564 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Mzf1S4R1L6 814 aa13.49□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Gm12248A0A1W2P8B8 313 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Gm5483B2RV77 97 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Gm20721E9Q2U8 318 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Raph1F2Z3U3 1266 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Pik3r2O08908 722 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 KitP05532 979 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 MutP16332 748 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Hmga1P17095 107 aaKnown RBP13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Klf1P46099 358 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 CidecP56198 239 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Cyp2c37P56654 490 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Smpdl3aP70158 445 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Colec11Q3SXB8 272 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Gpatch4Q3TFK5 415 aaKnown RBP13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Atxn7l3bQ3UD01 97 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Tmem151aQ6GQT5 468 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 ShbQ6PD21 503 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Cyp2c54Q6XVG2 490 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Tdpoz3Q717B4 365 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Naaladl1Q7M758 745 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Ccdc50Q810U5 305 aaKnown RBP13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Fbxw8Q8BIA4 598 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Acbd3Q8BMP6 525 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 GancQ8BVW0 898 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Trerf1Q8BXJ2 1205 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 RtknQ8C6B2 564 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 BfarQ8R079 450 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Cog4Q8R1U1 785 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Rsph1Q8VIG3 301 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Emid1Q91VF5 444 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Znf622Q91VY9 476 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Cyp2c50Q91X77 490 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Tekt2Q922G7 430 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Ndc80Q9D0F1 642 aaKnown RBP13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 ArskQ9D2L1 553 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Spatc1lQ9D9W0 342 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Clcn5Q9WVD4 746 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Dock3Q8CIQ7 2027 aa13.48□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Kif26aQ52KG5 1881 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Akap17bA2A3V1 959 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Ttc30a2A2AKQ8 664 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Gm4450E9Q007 373 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Zbtb11G5E8B9 1050 aaKnown RBP13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Gm3642K7N6V4 267 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Cdh16O88338 830 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Slc6a20bO88575 635 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Cdc6O89033 562 aaKnown RBP13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 P01740 135 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Gpr25P0C5I1 358 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Npr1P18293 1057 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Sult1e1P49891 295 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Ncf4P97369 339 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Grid2ipQ0QWG9 1203 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Trim71Q1PSW8 855 aaKnown RBP13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Serpina3gQ5I2A0 440 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Hsd3b4Q61767 373 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Cox8aQ64445 69 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Chst10Q6PGK7 356 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 RfflQ6ZQM0 377 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Rap2cQ8BU31 183 aa13.47□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms