RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 3830403N18RikQ9D6C3 208 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Rpn2Q9DBG6 631 aaKnown RBP12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Gprc5dQ9JIL6 344 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Mmel1Q9JLI3 765 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Grm3Q9QYS2 879 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Ggt5Q9Z2A9 573 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Unc13cQ8K0T7 2210 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Bod1lE9Q6J5 3032 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Kdf1A2A9F4 397 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Ssxb9A2BI93 185 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Saxo1B1AXP3 476 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Cpsf2O35218 782 aaKnown RBP12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Klra1P20937 262 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 RxrgP28705 463 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Slc6a13P31649 602 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Smpdl3bP58242 456 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Emilin3P59900 758 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Ap1s1P61967 158 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Casp4P70343 373 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Cdh6P97326 790 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Nhej1Q3KNJ2 295 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Grm5Q3UVX5 1203 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Abl2Q4JIM5 1182 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Spata48Q5NC83 441 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Klra5Q60652 266 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Bpifb1Q61114 474 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Lcp1Q61233 627 aaKnown RBP12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 N4bp1Q6A037 893 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Sarm1Q6PDS3 724 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Tecpr1Q80VP0 1166 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Phactr3Q8BYK5 558 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Sept10Q8C650 452 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Rsad2Q8CBB9 362 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Gsto2Q8K2Q2 248 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 BphlQ8R164 291 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Nup85Q8R480 656 aaKnown RBP12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Ecrg4Q99LS0 148 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Mis12Q9CY25 206 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Tmem135Q9CYV5 458 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Ppil1Q9D0W5 166 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Marveld3Q9D956 376 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Fut8Q9WTS2 575 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Mapk9Q9WTU6 423 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Asb4Q9WV71 426 aa12.29□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 SetxA2AKX3 2646 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Igkv17-127A0A0G2JDN5 117 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Mllt3A2AM29 569 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Slc35g2D3YVE8 412 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Pgbd5D3YZI9 523 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Ddx43D3Z6P9 646 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Glyatl3E9Q5L8 290 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Klf6O08584 283 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Sema3aO08665 772 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Socs5O54928 536 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 GmnnO88513 206 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Wnt1P04426 370 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Sod2P09671 222 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Il12aP43431 215 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Adcy5P84309 1262 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 TigitP86176 249 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Epas1P97481 874 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Agbl1Q09M05 972 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Gpatch4Q3TFK5 415 aaKnown RBP12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 CenplQ3U3S3 329 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Hdhd2Q3UGR5 259 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 4930438A08RikQ5SPH3 536 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Sema4aQ62178 760 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Sema4bQ62179 823 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Dusp23Q6NT99 150 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Taf1cQ6PDZ2 836 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Zfp438Q8BFX2 798 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Fam72aQ8BFZ8 149 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Rhot1Q8BG51 631 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 FicdQ8BIX9 458 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Nt5dc1Q8C5P5 467 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 CopaQ8CIE6 1224 aaKnown RBP12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Plekho2Q8K124 495 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Dusp15Q8R4V2 235 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Abcg4Q91WA9 646 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Akr1c14Q91WT7 323 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Trem2Q99NH8 227 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Zdhhc6Q9CPV7 413 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Luc7lQ9CYI4 371 aaKnown RBP12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Mrpl17Q9D8P4 176 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Llcfc1Q9D9P8 108 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Slc25a19Q9DAM5 318 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Prl8a6Q9DAY2 240 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 RhoaQ9QUI0 193 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Ulk2Q9QY01 1037 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Ankrd11E9Q4F7 2643 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Kif26bQ7TNC6 2112 aa12.28□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Fer1l5P0DM40 2038 aa12.27□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Gm3173A6NAS3 172 aa12.27□□□□□ -0.45
Ccdc28a-202ENSMUST00000080860 Tmem245B1AZA5 876 aa12.27□□□□□ -0.45
Ccdc28a-202ENSMUST00000080860 Vmn2r116E9Q6I0 856 aa12.27□□□□□ -0.45
Ccdc28a-202ENSMUST00000080860 Vmn2r8L7N472 848 aa12.27□□□□□ -0.45
Ccdc28a-202ENSMUST00000080860 Gcm2O09102 504 aa12.27□□□□□ -0.45
Ccdc28a-202ENSMUST00000080860 Limk2O54785 638 aa12.27□□□□□ -0.45
Ccdc28a-202ENSMUST00000080860 Grk4O70291 574 aa12.27□□□□□ -0.45
Ccdc28a-202ENSMUST00000080860 CraddO88843 199 aa12.27□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms