RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Itfg1Q99KW9 610 aa10.4□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 March2Q99M02 246 aa10.4□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Arl8bQ9CQW2 186 aa10.4□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 MrrfQ9D6S7 262 aaKnown RBP10.4□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Myh2G3UW82 1942 aa10.4□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Cyp4a29A0A087WPC3 509 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Zbed6D2EAC2 980 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 MutP16332 748 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Csn1s1P19228 313 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Pecam1Q08481 727 aaKnown RBP10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Colec11Q3SXB8 272 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Rnf180Q3U827 592 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Rhbdf1Q6PIX5 856 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Btnl1Q7TST0 509 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ugt2a1Q80X89 528 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Rsl1d1Q8BVY0 452 aaKnown RBP10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Kctd2Q8CEZ0 266 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Acad10Q8K370 1069 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Il36gQ8R460 164 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Slc44a3Q921V7 656 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Snrnp48Q9D361 337 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Efcab1Q9D3N2 212 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Col5a2Q3U962 1497 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Xlr5bA2BI50 236 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gm3259D3YUK0 475 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gm17615E9Q9P2 165 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gm20509G3UZF1 325 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Sypl2O89104 264 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 M6prP24668 278 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Acvr2bP27040 536 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Nek10Q3UGM2 1111 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Nxpe4Q52KP5 543 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Arhgap25Q8BYW1 648 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Wwp1Q8BZZ3 918 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Clip4Q8CI96 704 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Chrna3Q8R4G9 499 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Tmem80Q9D3H0 123 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Efhc1Q9D9T8 648 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Pole3Q9JKP7 145 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Hs6st1Q9QYK5 411 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Cry2Q9R194 592 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Arih2Q9Z1K6 492 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Abca3Q8R420 1704 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Slc6a21A0A1B0GSD2 748 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ccdc120A2AEV7 629 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Vmn2r73D3Z7M3 851 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gm3755K7N743 167 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Alas2P08680 587 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Rfx2P48379 717 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ptpn5P54830 541 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Shcbp1lQ3TTP0 639 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Papss1Q60967 624 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 HltfQ6PCN7 1003 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ppp2r1bQ7TNP2 601 aaKnown RBP10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Eme1Q8BJW7 570 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 SowahaQ8BLS7 548 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Cpsf4Q8BQZ5 211 aaKnown RBP10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Rab36Q8CAM5 267 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Nkd1Q99MH6 471 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Pih1d1Q9CQJ2 290 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 2010005H15RikQ9D8D6 97 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Cables1Q9ESJ1 568 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Pknox1O70477 436 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Asgr1P34927 284 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 VegfaQ00731 214 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Cntn3Q07409 1028 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 AcdQ5EE38 416 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Hbs1lQ69ZS7 682 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 LppQ8BFW7 613 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 PhykplQ8R1K4 467 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Scd3Q99PL7 359 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Hes6Q9JHE6 224 aa10.39□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Zfp472B0V2W5 534 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Mkrn2osD3Z393 217 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gm8257E9Q8R3 264 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Sema3aO08665 772 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 CfhP06909 1234 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Rassf5Q5EBH1 413 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Prmt6Q6NZB1 378 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Dnajb13Q80Y75 316 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Rdh13Q8CEE7 334 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Fig4Q91WF7 907 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gm21083A0A0G2JFD5 256 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Mtx3D3YTP3 312 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gm5415E9PXF3 478 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Npr1P18293 1057 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Serpina3mQ03734 418 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Eps15l1Q60902 907 aaKnown RBP10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Klhl5Q6PFE1 708 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 RfflQ6ZQM0 377 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Zfp446Q8C9M8 523 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 PolbQ8K409 335 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Olfr1353Q8VGU8 309 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Pcdhb17Q91VD8 799 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Zfp617Q91WM0 559 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Pcdhga10Q91XY9 930 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 GatbQ99JT1 557 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Dusp21Q9D9D8 189 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Dhx34Q9DBV3 1145 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Olfr704Q9EPF6 315 aa10.38□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 45.3 ms