RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 IkbkgO88522 412 aa18.58■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Lim2P56563 173 aa18.58■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Rab10P61027 200 aa18.58■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 PrkcgP63318 697 aa18.58■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Dnajc1Q61712 552 aaKnown RBP18.58■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 MafkQ61827 156 aa18.58■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Tbc1d12Q6A039 696 aa18.58■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Cyp2d40Q6P8N9 338 aa18.58■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Olfr798Q7TRH8 311 aa18.58■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Nipal1Q8BMW7 416 aa18.58■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Prkaa2Q8BRK8 552 aa18.58■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Ccdc151Q8BSN3 593 aa18.58■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Atxn7l2Q8C8K6 696 aa18.58■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Trpc4Q9QUQ5 974 aa18.58■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Msl3Q9WVG9 525 aa18.58■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Grin3aA2AIR5 1135 aa18.58■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Gm21293E9Q4G9 266 aa18.58■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Hmgxb3G3X9M3 1254 aa18.58■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Got2P05202 430 aaKnown RBP18.58■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 LynP25911 512 aa18.58■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Smpd1Q04519 627 aa18.58■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Klhl14Q69ZK5 630 aa18.58■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Akap7Q7TN79 314 aa18.58■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Q80Y73 168 aa18.58■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Serpinb10Q8K1K6 397 aa18.58■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Tbc1d19Q8VDV7 526 aa18.58■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Sult5a1Q91X36 291 aa18.58■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Arhgef3Q91X46 524 aa18.58■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Lims2Q91XD2 341 aa18.58■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 SmtnQ921U8 923 aa18.58■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Mtfr1Q99MB2 328 aa18.58■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Nipsnap3bQ9CQE1 247 aa18.58■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 RpgrQ9R0X5 1001 aa18.58■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Cntnap3E9PY62 1287 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Ctbp1O88712 441 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Ncf4P97369 339 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Pld2P97813 933 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 OsbpQ3B7Z2 805 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Nup93Q8BJ71 819 aaKnown RBP18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Cabcoco1Q8CDT7 208 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Ppp6r2Q8R3Q2 923 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Ssx2ipQ8VC66 615 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Kif12Q9D2Z8 642 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Trim54Q9ERP3 366 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Cacng3Q9JJV5 315 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Tbk1Q9WUN2 729 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Apobec2Q9WV35 224 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Trpm7Q923J1 1863 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Akap5D3YVF0 745 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Gm8257E9Q8R3 264 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 CrymO54983 313 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Cd72P21855 354 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Pitpnm3Q3UHE1 974 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Itih1Q61702 907 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Smpd4Q6ZPR5 823 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Olfr867Q7TRF3 331 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Pcid2Q8BFV2 399 aaKnown RBP18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Kctd13Q8BGV7 329 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Sept10Q8C650 452 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Katnbl1Q9CWJ3 299 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Rnaseh2aQ9CWY8 301 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Q9D1Z2 194 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Olfr711Q9EPG2 314 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Mmp19Q9JHI0 527 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Gm45713A0A1B0GS68 446 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 PtprcP06800 1291 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Atxn1lP0C7T6 687 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Kcnc1P15388 511 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Sipa1P46062 1037 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Znf865Q3U3I9 1058 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Akap14Q3V0I7 536 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Mppe1Q80XL7 396 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Best2Q8BGM5 508 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Msantd1Q8BIL2 278 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Ticam2Q8BJQ4 232 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Zcchc4Q8BKW4 512 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Zfp566Q8VCI1 386 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Catsper1Q91ZR5 686 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Mccc1Q99MR8 717 aa18.57■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Kdelc2G5E897 503 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Rhox2gL7MUB9 191 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 P01652 108 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Sdr16c6Q05A13 316 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Tespa1Q3U132 458 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Olfr463Q5SW49 311 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Olfr462Q5SW50 311 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Mef2dQ63943 514 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Cntn4Q69Z26 1026 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Podnl1Q6P3Y9 559 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Fads6Q80UG1 342 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Polr2eQ80UW8 210 aaKnown RBP18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Sfrp1Q8C4U3 314 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Prpf19Q99KP6 504 aaKnown RBP18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Cd320Q9Z1P5 260 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Pcsk6F6XJP7 959 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Vmn1r76F8VQ63 324 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Olfr292F8VQ84 308 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Gm3164L7N2B9 238 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Gm3264L7N2C5 238 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 P01668 110 aa18.56■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms