RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 COL15A1P39059 1388 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 BCL9LQ86UU0 1499 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 CEP170BQ9Y4F5 1589 aaPredicted RBP3.46□□□□□ -1.86
VPS8-228ENST00000628962 TBC1D3DA0A087WVF3 549 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 TBC1D3IA0A087WXS9 549 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 TBC1D3EA0A087X179 549 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 TBC1D3KA0A087X1G2 549 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 TBC1D3BA6NDS4 549 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 TBC1D3FA6NER0 549 aaPredicted RBP3.45□□□□□ -1.86
VPS8-228ENST00000628962 AGAP5A6NIR3 686 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 MBD3L5A6NJ08 208 aaPredicted RBP3.45□□□□□ -1.86
VPS8-228ENST00000628962 TSPY2A6NKD2 308 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 TBC1D3LB9A6J9 549 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 HNRNPRO43390 633 aaKnown RBP3.45□□□□□ -1.86
VPS8-228ENST00000628962 TSPAN9O75954 239 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 HEXIM1O94992 359 aaKnown RBP3.45□□□□□ -1.86
VPS8-228ENST00000628962 SGPL1O95470 568 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 DNTTP04053 509 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 RPN1P04843 607 aaKnown RBP3.45□□□□□ -1.86
VPS8-228ENST00000628962 CLEC3BP05452 202 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 CYP21A2P08686 494 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 TBC1D3HP0C7X1 549 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 TSPY3P0CV98 308 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 TSPY8P0CW00 308 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 TMEM225BP0DP42 221 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 TNNT1P13805 278 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 CD19P15391 556 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 GALNSP34059 522 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 HTR7P34969 479 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 HOXD13P35453 343 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 PBX1P40424 430 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 MLH1P40692 756 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 PNPLA4P41247 253 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 HARS2P49590 506 aaKnown RBP3.45□□□□□ -1.86
VPS8-228ENST00000628962 DIO1P49895 249 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 RARSP54136 660 aaKnown RBP3.45□□□□□ -1.86
VPS8-228ENST00000628962 SNX16P57768 344 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 EIF4A1P60842 406 aaKnown RBP3.45□□□□□ -1.86
VPS8-228ENST00000628962 YPEL5P62699 121 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 TSPY1Q01534 308 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 BFSP2Q13515 415 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 CBFBQ13951 182 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 CAMK1Q14012 370 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 PSMD6Q15008 389 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 LRRC24Q50LG9 513 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 CBWD5Q5RIA9 395 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 SNX30Q5VWJ9 437 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 TBC1D3GQ6DHY5 549 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 TBC1D3CQ6IPX1 549 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 CCDC144NLQ6NUI1 221 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 FBXL22Q6P050 247 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 PIK3AP1Q6ZUJ8 805 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 ANKRD23Q86SG2 305 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 RAB11FIP4Q86YS3 637 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 P3H2Q8IVL5 708 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 RPAP2Q8IXW5 612 aaPredicted RBP3.45□□□□□ -1.86
VPS8-228ENST00000628962 TBC1D3Q8IZP1 549 aaPredicted RBP3.45□□□□□ -1.86
VPS8-228ENST00000628962 MAFAQ8NHW3 353 aaPredicted RBP3.45□□□□□ -1.86
VPS8-228ENST00000628962 NFKBIDQ8NI38 313 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 SLC2A12Q8TD20 617 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 WFIKKN2Q8TEU8 576 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 ASB5Q8WWX0 329 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 SLC25A28Q96A46 364 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 KIF1BPQ96EK5 621 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 FAR2Q96K12 515 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 FUZQ9BT04 418 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 VN1R3Q9BXE9 311 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 SH3GLB2Q9NR46 395 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 TAS2R10Q9NYW0 307 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 NFKBIL1Q9UBC1 381 aaPredicted RBP3.45□□□□□ -1.86
VPS8-228ENST00000628962 TRPC5Q9UL62 973 aaPredicted RBP3.45□□□□□ -1.86
VPS8-228ENST00000628962 MAFFQ9ULX9 164 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 DRG1Q9Y295 367 aaKnown RBP3.45□□□□□ -1.86
VPS8-228ENST00000628962 PCDHB7Q9Y5E2 793 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 A2ML1A8K2U0 1454 aa3.45□□□□□ -1.86
VPS8-228ENST00000628962 PLCH2O75038 1416 aa3.44□□□□□ -1.86
VPS8-228ENST00000628962 RAPGEF6Q8TEU7 1601 aa3.44□□□□□ -1.86
VPS8-228ENST00000628962 RNF17Q9BXT8 1623 aaKnown RBP3.44□□□□□ -1.86
VPS8-228ENST00000628962 GXYLT2A0PJZ3 443 aa3.44□□□□□ -1.86
VPS8-228ENST00000628962 M0QYT0 321 aa3.44□□□□□ -1.86
VPS8-228ENST00000628962 PSMD9O00233 223 aa3.44□□□□□ -1.86
VPS8-228ENST00000628962 CTIFO43310 598 aaKnown RBP3.44□□□□□ -1.86
VPS8-228ENST00000628962 CBFA2T3O75081 653 aa3.44□□□□□ -1.86
VPS8-228ENST00000628962 CCNDBP1O95273 360 aa3.44□□□□□ -1.86
VPS8-228ENST00000628962 VDRP11473 427 aa3.44□□□□□ -1.86
VPS8-228ENST00000628962 PSMA4P25789 261 aaKnown RBP3.44□□□□□ -1.86
VPS8-228ENST00000628962 GRK5P34947 590 aa3.44□□□□□ -1.86
VPS8-228ENST00000628962 GPD2P43304 727 aa3.44□□□□□ -1.86
VPS8-228ENST00000628962 PCP4P48539 62 aa3.44□□□□□ -1.86
VPS8-228ENST00000628962 PRELPP51888 382 aa3.44□□□□□ -1.86
VPS8-228ENST00000628962 DGKQP52824 942 aa3.44□□□□□ -1.86
VPS8-228ENST00000628962 PGGT1BP53609 377 aa3.44□□□□□ -1.86
VPS8-228ENST00000628962 RPS3AP61247 264 aaKnown RBP3.44□□□□□ -1.86
VPS8-228ENST00000628962 MC1RQ01726 317 aa3.44□□□□□ -1.86
VPS8-228ENST00000628962 CHAF1BQ13112 559 aa3.44□□□□□ -1.86
VPS8-228ENST00000628962 SEMA3BQ13214 749 aa3.44□□□□□ -1.86
VPS8-228ENST00000628962 DCTN2Q13561 401 aaKnown RBP3.44□□□□□ -1.86
VPS8-228ENST00000628962 STIM1Q13586 685 aa3.44□□□□□ -1.86
VPS8-228ENST00000628962 ACOX1Q15067 660 aa3.44□□□□□ -1.86
VPS8-228ENST00000628962 ST3GAL2Q16842 350 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms