RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 ITGB7P26010 798 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 EIF4A3P38919 411 aaKnown RBP12.49□□□□□ -0.41
CTSA-210ENST00000606000 CCT8P50990 548 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 NXPH1P58417 271 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 YBEYP58557 167 aaPredicted RBP12.49□□□□□ -0.41
CTSA-210ENST00000606000 RHOAP61586 193 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 FGL2Q14314 439 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 CYTH1Q15438 398 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 ZNF423Q2M1K9 1284 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 ZNF284Q2VY69 593 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 PARP15Q460N3 678 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 CCDC122Q5T0U0 273 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 SPATS2Q86XZ4 545 aaKnown RBP12.49□□□□□ -0.41
CTSA-210ENST00000606000 ARHGAP12Q8IWW6 846 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 PNPLA1Q8N8W4 532 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 BAHD1Q8TBE0 780 aaPredicted RBP12.49□□□□□ -0.41
CTSA-210ENST00000606000 HSPH1Q92598 858 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 ISG20Q96AZ6 181 aaKnown RBP12.49□□□□□ -0.41
CTSA-210ENST00000606000 PPP1R16AQ96I34 528 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 NUP85Q9BW27 656 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 PACSIN1Q9BY11 444 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 HDAC8Q9BY41 377 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 ZWILCHQ9H900 591 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 MRPL47Q9HD33 250 aaKnown RBP12.49□□□□□ -0.41
CTSA-210ENST00000606000 CWC15Q9P013 229 aaKnown RBP12.49□□□□□ -0.41
CTSA-210ENST00000606000 ANAPC7Q9UJX3 599 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 BZW2Q9Y6E2 419 aaKnown RBP12.49□□□□□ -0.41
CTSA-210ENST00000606000 CACNA1EQ15878 2313 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 A0A1B0GTQ1 180 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 C16orf96A6NNT2 1141 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 DFFAO00273 331 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 PIGNO95427 931 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 CYP1A2P05177 515 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 ITIH2P19823 946 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 RGRP47804 291 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 PAPOLAP51003 745 aaKnown RBP12.48□□□□□ -0.41
CTSA-210ENST00000606000 GEMIN4P57678 1058 aaKnown RBP12.48□□□□□ -0.41
CTSA-210ENST00000606000 CLDN2P57739 230 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 SNRPD1P62314 119 aaKnown RBP12.48□□□□□ -0.41
CTSA-210ENST00000606000 SHC2P98077 582 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 SLC25A11Q02978 314 aaKnown RBP12.48□□□□□ -0.41
CTSA-210ENST00000606000 DPYSQ14117 519 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 TRIP6Q15654 476 aaKnown RBP12.48□□□□□ -0.41
CTSA-210ENST00000606000 MYLK3Q32MK0 819 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 SETMARQ53H47 684 aaPredicted RBP12.48□□□□□ -0.41
CTSA-210ENST00000606000 SPECC1LQ69YQ0 1117 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 ALKBH5Q6P6C2 394 aaKnown RBP12.48□□□□□ -0.41
CTSA-210ENST00000606000 FBXL19Q6PCT2 694 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 DBX2Q6ZNG2 339 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 VPS36Q86VN1 386 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 HORMAD1Q86X24 394 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 TMEM145Q8NBT3 493 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 IQCDQ96DY2 449 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 GDAP1L1Q96MZ0 367 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 KLHL32Q96NJ5 620 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 ELF4Q99607 663 aaPredicted RBP12.48□□□□□ -0.41
CTSA-210ENST00000606000 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.48□□□□□ -0.41
CTSA-210ENST00000606000 ETNK2Q9NVF9 386 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 UBA2Q9UBT2 640 aaPredicted RBP12.48□□□□□ -0.41
CTSA-210ENST00000606000 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.48□□□□□ -0.41
CTSA-210ENST00000606000 FADS3Q9Y5Q0 445 aa12.48□□□□□ -0.41
CTSA-210ENST00000606000 ANKRD36A6QL64 1941 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 CXorf51AA0A1B0GTR3 108 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 ZSCAN5CA6NGD5 496 aaPredicted RBP12.47□□□□□ -0.41
CTSA-210ENST00000606000 GOLGA8CPA6NN73 597 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 TLR4O00206 839 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 RAD51BO15315 384 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 FLRT2O43155 660 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 DAPK3O43293 454 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 PRAMEF11O60813 436 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 IGSF6O95976 241 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 FTH1P19P0C7X4 201 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 RARAP10276 462 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 AMPD1P23109 780 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 HNRNPH3P31942 346 aaKnown RBP12.47□□□□□ -0.41
CTSA-210ENST00000606000 HTR7P34969 479 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 PCK1P35558 622 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 NDST2P52849 883 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 ADKP55263 362 aaKnown RBP12.47□□□□□ -0.41
CTSA-210ENST00000606000 TMEM259Q4ZIN3 620 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 ZNF805Q5CZA5 627 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 AFMIDQ63HM1 303 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 GCNT7Q6ZNI0 430 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 VSTM4Q8IW00 320 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 PLPP6Q8IY26 295 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 CHCHD4Q8N4Q1 142 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 MFSD2AQ8NA29 543 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 RHBDD1Q8TEB9 315 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 DNAJC7Q99615 494 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 SCNM1Q9BWG6 230 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 GDF3Q9NR23 364 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 TOR4AQ9NXH8 423 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 KLK13Q9UKR3 277 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 DMTF1Q9Y222 760 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 PCDHB9Q9Y5E1 797 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 PCDHGB2Q9Y5G2 931 aa12.47□□□□□ -0.41
CTSA-210ENST00000606000 C1QTNF9BB2RNN3 333 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 PRAMEF26H0Y7S4 382 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 CBFA2T2O43439 604 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 PCDHGA12O60330 932 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms