RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.01□□□□□ -0.17
SCAF1-203ENST00000598359 SMG1Q96Q15 3661 aaKnown RBP14.01□□□□□ -0.17
SCAF1-203ENST00000598359 PCDHGA12O60330 932 aa14□□□□□ -0.17
SCAF1-203ENST00000598359 PCDH8O95206 1070 aa14□□□□□ -0.17
SCAF1-203ENST00000598359 TRIM16O95361 564 aa14□□□□□ -0.17
SCAF1-203ENST00000598359 FTLP02792 175 aaPredicted RBP14□□□□□ -0.17
SCAF1-203ENST00000598359 PSMA2P25787 234 aa14□□□□□ -0.17
SCAF1-203ENST00000598359 GRK6P43250 576 aa14□□□□□ -0.17
SCAF1-203ENST00000598359 KLHL30Q0D2K2 578 aa14□□□□□ -0.17
SCAF1-203ENST00000598359 BNIP3Q12983 259 aa14□□□□□ -0.17
SCAF1-203ENST00000598359 NR1I3Q14994 352 aa14□□□□□ -0.17
SCAF1-203ENST00000598359 CA9Q16790 459 aa14□□□□□ -0.17
SCAF1-203ENST00000598359 ZNF284Q2VY69 593 aa14□□□□□ -0.17
SCAF1-203ENST00000598359 SETMARQ53H47 684 aaPredicted RBP14□□□□□ -0.17
SCAF1-203ENST00000598359 PARS2Q7L3T8 475 aaKnown RBP14□□□□□ -0.17
SCAF1-203ENST00000598359 ARFGAP1Q8N6T3 406 aa14□□□□□ -0.17
SCAF1-203ENST00000598359 RTL3Q8N8U3 475 aaKnown RBP14□□□□□ -0.17
SCAF1-203ENST00000598359 ADAMTS14Q8WXS8 1223 aa14□□□□□ -0.17
SCAF1-203ENST00000598359 SKA1Q96BD8 255 aa14□□□□□ -0.17
SCAF1-203ENST00000598359 HMCESQ96FZ2 354 aa14□□□□□ -0.17
SCAF1-203ENST00000598359 PEBP4Q96S96 227 aa14□□□□□ -0.17
SCAF1-203ENST00000598359 CDC6Q99741 560 aa14□□□□□ -0.17
SCAF1-203ENST00000598359 HDAC8Q9BY41 377 aa14□□□□□ -0.17
SCAF1-203ENST00000598359 AIPL1Q9NZN9 384 aa14□□□□□ -0.17
SCAF1-203ENST00000598359 PCSK1NQ9UHG2 260 aa14□□□□□ -0.17
SCAF1-203ENST00000598359 APOBEC2Q9Y235 224 aaKnown RBP14□□□□□ -0.17
SCAF1-203ENST00000598359 MSRB2Q9Y3D2 182 aa14□□□□□ -0.17
SCAF1-203ENST00000598359 DOCK9Q9BZ29 2069 aa14□□□□□ -0.17
SCAF1-203ENST00000598359 RASA4BC9J798 803 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 KRIT1O00522 736 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 RASA4O43374 803 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 BUB1O43683 1085 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 KDELR3O43731 214 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 ITGAVP06756 1048 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 ADRB3P13945 408 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 ETFBP38117 255 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 CLDN2P57739 230 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 FANCCQ00597 558 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 MAPK8IP2Q13387 824 aaPredicted RBP13.99□□□□□ -0.17
SCAF1-203ENST00000598359 STAT4Q14765 748 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 SLC45A4Q5BKX6 768 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 LRRC73Q5JTD7 316 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 PLEKHA7Q6IQ23 1121 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 HORMAD1Q86X24 394 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 MFSD2AQ8NA29 543 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 SAP25Q8TEE9 199 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 ZCCHC14Q8WYQ9 949 aaKnown RBP13.99□□□□□ -0.17
SCAF1-203ENST00000598359 VOPP1Q96AW1 172 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 PPP1R16AQ96I34 528 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 EPAS1Q99814 870 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 PARVAQ9NVD7 372 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 MYO1AQ9UBC5 1043 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 GGT7Q9UJ14 662 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 HPCAL4Q9UM19 191 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 DMTF1Q9Y222 760 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 ITM2BQ9Y287 266 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 CABIN1Q9Y6J0 2220 aa13.99□□□□□ -0.17
SCAF1-203ENST00000598359 TMEM191CA6NGB0 347 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 PRAMEF26H0Y7S4 382 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 TAF4O00268 1085 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 DFNA5O60443 496 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 SDC3O75056 442 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 TMCC1O94876 653 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 UGT2B4P06133 528 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 ITGB7P26010 798 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 EPHA8P29322 1005 aaPredicted RBP13.98□□□□□ -0.17
SCAF1-203ENST00000598359 PRKCIP41743 596 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 ABL2P42684 1182 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 NEK3P51956 506 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 FGL2Q14314 439 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 FBXL19Q6PCT2 694 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 KDM7AQ6ZMT4 941 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 EID2Q8N6I1 236 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 TMEM145Q8NBT3 493 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 CPLX3Q8WVH0 158 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 ISG20Q96AZ6 181 aaKnown RBP13.98□□□□□ -0.17
SCAF1-203ENST00000598359 ZNF653Q96CK0 615 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 CELF6Q96J87 481 aaKnown RBP13.98□□□□□ -0.17
SCAF1-203ENST00000598359 VCPIP1Q96JH7 1222 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 EXOC2Q96KP1 924 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 DHX35Q9H5Z1 703 aaKnown RBP13.98□□□□□ -0.17
SCAF1-203ENST00000598359 FTSJ1Q9UET6 329 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 CNOT8Q9UFF9 292 aaKnown RBP13.98□□□□□ -0.17
SCAF1-203ENST00000598359 TPX2Q9ULW0 747 aaKnown RBP13.98□□□□□ -0.17
SCAF1-203ENST00000598359 AP4E1Q9UPM8 1137 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 FADS3Q9Y5Q0 445 aa13.98□□□□□ -0.17
SCAF1-203ENST00000598359 FREM2Q5SZK8 3169 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 CHD5Q8TDI0 1954 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 C16orf96A6NNT2 1141 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 RAD51BO15315 384 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 INSIG1O15503 277 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 TNFSF14O43557 240 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 GSRP00390 522 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 THEGLP0DJG4 465 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 ITIH2P19823 946 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 AKT2P31751 481 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 CLDN6P56747 220 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 TPI1P60174 286 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 DNAJC3Q13217 504 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 SERINC3Q13530 473 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms