RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 ADRA1BP35368 520 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 POLR2FP61218 127 aaKnown RBP10.71□□□□□ -0.69
LSM4-205ENST00000597776 FMO1Q01740 532 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 CDR2Q01850 454 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 CCDC173Q0VFZ6 552 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 TBC1D25Q3MII6 688 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 LRRC73Q5JTD7 316 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 ATXN7L2Q5T6C5 722 aaPredicted RBP10.71□□□□□ -0.69
LSM4-205ENST00000597776 ARCQ7LC44 396 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 NLRP14Q86W24 1093 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 CACTIN-AS1Q8N1I8 211 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 CCDC185Q8N715 623 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 NETO2Q8NC67 525 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 ZNF548Q8NEK5 533 aaPredicted RBP10.71□□□□□ -0.69
LSM4-205ENST00000597776 BAP1Q92560 729 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 FGF11Q92914 225 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 ARHGEF2Q92974 986 aaKnown RBP10.71□□□□□ -0.69
LSM4-205ENST00000597776 VOPP1Q96AW1 172 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 IFT43Q96FT9 208 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 FEM1CQ96JP0 617 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 KLF6Q99612 283 aaPredicted RBP10.71□□□□□ -0.69
LSM4-205ENST00000597776 OSBPL2Q9H1P3 480 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 PRORYQ9H606 182 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 NLRC4Q9NPP4 1024 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 FAM207AQ9NSI2 230 aaPredicted RBP10.71□□□□□ -0.69
LSM4-205ENST00000597776 TMEM51Q9NW97 253 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 NLGN3Q9NZ94 848 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 CHMP5Q9NZZ3 219 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 KLF15Q9UIH9 416 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 HS3ST3A1Q9Y663 406 aa10.71□□□□□ -0.69
LSM4-205ENST00000597776 TDRD6O60522 2096 aaKnown RBP10.7□□□□□ -0.7
LSM4-205ENST00000597776 SPTY2D1-AS1A0A0U1RR47 76 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 C2CD4BA6NLJ0 364 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 NEMP1O14524 444 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 SCAMP1O15126 338 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 LRIG2O94898 1065 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 CSF2P04141 144 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 CYP1A1P04798 512 aaPredicted RBP10.7□□□□□ -0.7
LSM4-205ENST00000597776 MPOP05164 745 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 UGT2B4P06133 528 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 PLEKP08567 350 aaPredicted RBP10.7□□□□□ -0.7
LSM4-205ENST00000597776 NME1P15531 152 aaKnown RBP10.7□□□□□ -0.7
LSM4-205ENST00000597776 RHOQP17081 205 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 EEF1GP26641 437 aaKnown RBP10.7□□□□□ -0.7
LSM4-205ENST00000597776 SDC4P31431 198 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 ETFBP38117 255 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 RABIFP47224 123 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 MAPKAPK2P49137 400 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 HDAC4P56524 1084 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 JAM2P57087 298 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 HNRNPKP61978 463 aaKnown RBP eCLIP10.7□□□□□ -0.7
LSM4-205ENST00000597776 NRG1Q02297 640 aaPredicted RBP10.7□□□□□ -0.7
LSM4-205ENST00000597776 PTP4A2Q12974 167 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 SGCGQ13326 291 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 PDE1CQ14123 709 aaPredicted RBP10.7□□□□□ -0.7
LSM4-205ENST00000597776 KRT31Q15323 416 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 ARL13BQ3SXY8 428 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 ZNF805Q5CZA5 627 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 CDCP2Q5VXM1 449 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 PARGQ86W56 976 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 ZNF677Q86XU0 584 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 DCP2Q8IU60 420 aaKnown RBP10.7□□□□□ -0.7
LSM4-205ENST00000597776 IFI44Q8TCB0 444 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 FAM172AQ8WUF8 416 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 ISG20Q96AZ6 181 aaKnown RBP10.7□□□□□ -0.7
LSM4-205ENST00000597776 NAF1Q96HR8 494 aaKnown RBP10.7□□□□□ -0.7
LSM4-205ENST00000597776 FCRL3Q96P31 734 aaPredicted RBP10.7□□□□□ -0.7
LSM4-205ENST00000597776 UBL7Q96S82 380 aaPredicted RBP10.7□□□□□ -0.7
LSM4-205ENST00000597776 PCDHB18PQ96TA0 734 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 C1QTNF2Q9BXJ5 285 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 TMEM248Q9NWD8 314 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 IPO11Q9UI26 975 aaKnown RBP10.7□□□□□ -0.7
LSM4-205ENST00000597776 ASXL3Q9C0F0 2248 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 TRPM6Q9BX84 2022 aa10.7□□□□□ -0.7
LSM4-205ENST00000597776 NEMP2A6NFY4 417 aa10.69□□□□□ -0.7
LSM4-205ENST00000597776 H3BM21 787 aa10.69□□□□□ -0.7
LSM4-205ENST00000597776 FPGTO14772 594 aa10.69□□□□□ -0.7
LSM4-205ENST00000597776 TSPAN6O43657 245 aa10.69□□□□□ -0.7
LSM4-205ENST00000597776 RAMP2O60895 175 aa10.69□□□□□ -0.7
LSM4-205ENST00000597776 USP12O75317 370 aa10.69□□□□□ -0.7
LSM4-205ENST00000597776 CSO75390 466 aaKnown RBP10.69□□□□□ -0.7
LSM4-205ENST00000597776 TMCC1O94876 653 aa10.69□□□□□ -0.7
LSM4-205ENST00000597776 JUNDP17535 347 aa10.69□□□□□ -0.7
LSM4-205ENST00000597776 ITIH2P19823 946 aa10.69□□□□□ -0.7
LSM4-205ENST00000597776 RFC1P35251 1148 aaPredicted RBP10.69□□□□□ -0.7
LSM4-205ENST00000597776 ACTN2P35609 894 aa10.69□□□□□ -0.7
LSM4-205ENST00000597776 SOX5P35711 763 aa10.69□□□□□ -0.7
LSM4-205ENST00000597776 PTPN9P43378 593 aa10.69□□□□□ -0.7
LSM4-205ENST00000597776 PFN3P60673 137 aa10.69□□□□□ -0.7
LSM4-205ENST00000597776 GABREP78334 506 aa10.69□□□□□ -0.7
LSM4-205ENST00000597776 TLE3Q04726 772 aa10.69□□□□□ -0.7
LSM4-205ENST00000597776 EIF2B5Q13144 721 aaKnown RBP10.69□□□□□ -0.7
LSM4-205ENST00000597776 POLD3Q15054 466 aaPredicted RBP10.69□□□□□ -0.7
LSM4-205ENST00000597776 CDKN3Q16667 212 aa10.69□□□□□ -0.7
LSM4-205ENST00000597776 DEFB133Q30KQ1 61 aa10.69□□□□□ -0.7
LSM4-205ENST00000597776 MYLK3Q32MK0 819 aa10.69□□□□□ -0.7
LSM4-205ENST00000597776 CDKAL1Q5VV42 579 aa10.69□□□□□ -0.7
LSM4-205ENST00000597776 GUSBP11Q6P575 273 aa10.69□□□□□ -0.7
LSM4-205ENST00000597776 STRADAQ7RTN6 431 aa10.69□□□□□ -0.7
LSM4-205ENST00000597776 ZNF354CQ86Y25 554 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms