RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 KRIT1O00522 736 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 FPGTO14772 594 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 SCAMP1O15126 338 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 CASC3O15234 703 aaKnown RBP6.53□□□□□ -1.36
SDF2-205ENST00000587629 ATXN7O15265 892 aaPredicted RBP6.53□□□□□ -1.36
SDF2-205ENST00000587629 SPINT1O43278 529 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 C1QL1O75973 258 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 GJB6O95452 261 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 CSF2P04141 144 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 MMEP08473 750 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 ITIH2P19823 946 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 TGM2P21980 687 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 ITGB7P26010 798 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 L1CAMP32004 1257 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 GABRB2P47870 512 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 SERPINH1P50454 418 aaKnown RBP6.53□□□□□ -1.36
SDF2-205ENST00000587629 CCNHP51946 323 aaPredicted RBP6.53□□□□□ -1.36
SDF2-205ENST00000587629 BPIFB4P59827 614 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 ARF5P84085 180 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 C1orf61Q13536 156 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 PDE1CQ14123 709 aaPredicted RBP6.53□□□□□ -1.36
SDF2-205ENST00000587629 TCEA2Q15560 299 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 MAN2A1Q16706 1144 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 CDO1Q16878 200 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 C15orf59Q2T9L4 293 aaPredicted RBP6.53□□□□□ -1.36
SDF2-205ENST00000587629 MIIPQ5JXC2 388 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 ATXN7L2Q5T6C5 722 aaPredicted RBP6.53□□□□□ -1.36
SDF2-205ENST00000587629 ARHGAP40Q5TG30 622 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 KLHDC7AQ5VTJ3 777 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 NAA35Q5VZE5 725 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 DPY19L2P1Q6NXN4 242 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 GUSBP11Q6P575 273 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 EFL1Q7Z2Z2 1120 aaKnown RBP6.53□□□□□ -1.36
SDF2-205ENST00000587629 GPR155Q7Z3F1 870 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 NOP9Q86U38 636 aaKnown RBP6.53□□□□□ -1.36
SDF2-205ENST00000587629 MLKLQ8NB16 471 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 ZNF548Q8NEK5 533 aaPredicted RBP6.53□□□□□ -1.36
SDF2-205ENST00000587629 SLC30A5Q8TAD4 765 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 LMX1AQ8TE12 382 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 SLC20A1Q8WUM9 679 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 PGAP3Q96FM1 320 aaPredicted RBP6.53□□□□□ -1.36
SDF2-205ENST00000587629 DEPDC7Q96QD5 511 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 HAPLN3Q96S86 360 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 TUBGCP2Q9BSJ2 902 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.53□□□□□ -1.36
SDF2-205ENST00000587629 TCEAL2Q9H3H9 227 aaPredicted RBP6.53□□□□□ -1.36
SDF2-205ENST00000587629 NDST4Q9H3R1 872 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 SYNDIG1Q9H7V2 258 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 METTL5Q9NRN9 209 aaKnown RBP6.53□□□□□ -1.36
SDF2-205ENST00000587629 NDFIP2Q9NV92 336 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 WDR70Q9NW82 654 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 ZNF212Q9UDV6 495 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 OR12D3Q9UGF7 316 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 TMEM59LQ9UK28 342 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 HS3ST3A1Q9Y663 406 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 U3KQA8 63 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 KNTC1P50748 2209 aa6.53□□□□□ -1.36
SDF2-205ENST00000587629 SPTY2D1-AS1A0A0U1RR47 76 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 PMS2P1A4D2B8 440 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 FAM72CH0Y354 149 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 H3BM21 787 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 MUSKO15146 869 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 KLK10O43240 276 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 AQP9O43315 295 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 MMP20O60882 483 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 GFPT2O94808 682 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 CD160O95971 181 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 UGT2B4P06133 528 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 KRT10P13645 584 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 NME1P15531 152 aaKnown RBP6.52□□□□□ -1.37
SDF2-205ENST00000587629 JUNDP17535 347 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 CDH5P33151 784 aaPredicted RBP6.52□□□□□ -1.37
SDF2-205ENST00000587629 ADRA1BP35368 520 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 ABL2P42684 1182 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 RABIFP47224 123 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 KLK7P49862 253 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 DUSP3P51452 185 aaPredicted RBP6.52□□□□□ -1.37
SDF2-205ENST00000587629 ADKP55263 362 aaKnown RBP6.52□□□□□ -1.37
SDF2-205ENST00000587629 PCBP4P57723 403 aaKnown RBP6.52□□□□□ -1.37
SDF2-205ENST00000587629 HNRNPKP61978 463 aaKnown RBP eCLIP6.52□□□□□ -1.37
SDF2-205ENST00000587629 SLC20A2Q08357 652 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 MYLK3Q32MK0 819 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 DPCR1Q3MIW9 517 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 TAF1BQ53T94 588 aaPredicted RBP6.52□□□□□ -1.37
SDF2-205ENST00000587629 C3orf38Q5JPI3 329 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 FAM72AQ5TYM5 149 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 CDCP2Q5VXM1 449 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 FAM72DQ6L9T8 149 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 KIAA1161Q6NSJ0 714 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 KYAT3Q6YP21 454 aaKnown RBP6.52□□□□□ -1.37
SDF2-205ENST00000587629 ZNF783Q6ZMS7 281 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 ZNF605Q86T29 641 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 TTC7BQ86TV6 843 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 VPS36Q86VN1 386 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 PARGQ86W56 976 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 FAM72BQ86X60 149 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 ZNF354CQ86Y25 554 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 DCP2Q8IU60 420 aaKnown RBP6.52□□□□□ -1.37
SDF2-205ENST00000587629 FAM114A1Q8IWE2 563 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 RBFAQ8N0V3 343 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms