RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 FAM26FQ5R3K3 315 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 RAP1GAP2Q684P5 730 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 ERN2Q76MJ5 926 aaKnown RBP7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 HEATR4Q86WZ0 1026 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 CIR1Q86X95 450 aaPredicted RBP7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 CCNJLQ8IV13 435 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 FAM114A1Q8IWE2 563 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 SFTPA2Q8IWL1 248 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 SCML4Q8N228 414 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 SH2D3CQ8N5H7 860 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 IL22RA1Q8N6P7 574 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 Q8N9G6 341 aaPredicted RBP7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 CHST14Q8NCH0 376 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 OR2A12Q8NGT7 310 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 PCDH19Q8TAB3 1148 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 GPBAR1Q8TDU6 330 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 CLEC4CQ8WTT0 213 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 TCTN2Q96GX1 697 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 SLC45A3Q96JT2 553 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 ZSCAN31Q96LW9 406 aaPredicted RBP7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 LENG8Q96PV6 779 aaPredicted RBP7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 CMKLR1Q99788 373 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 BACH2Q9BYV9 841 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 PRDM8Q9NQV8 689 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 DMAC2Q9NW81 257 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 DONSONQ9NYP3 566 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 OR51B4Q9Y5P0 310 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 CLIC4Q9Y696 253 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 SPG11Q96JI7 2443 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 NIPBLQ6KC79 2804 aaeCLIP7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 FPGTO14772 594 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 CNTN5O94779 1100 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 MOCS2O96007 188 aaPredicted RBP7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 MT-CO1P00395 513 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 LDLRP01130 860 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 PDGFAP04085 211 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 FGF3P11487 239 aaPredicted RBP7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 SRCP12931 536 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 TACR2P21452 398 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 STAT6P42226 847 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 RPS21P63220 83 aaKnown RBP7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 TCEA2Q15560 299 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 ARHGAP44Q17R89 818 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 GOLGA7BQ2TAP0 167 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 DEFB109BQ30KR1 87 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 ATP1A1-AS1Q5TC04 95 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 KIAA1161Q6NSJ0 714 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 CCDC73Q6ZRK6 1079 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 SPRED1Q7Z699 444 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 CCDC117Q8IWD4 279 aaPredicted RBP7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 CACNA2D3Q8IZS8 1091 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 CCAR2Q8N163 923 aaKnown RBP7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 TEX19Q8NA77 164 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 TMIEQ8NEW7 156 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 GPR156Q8NFN8 814 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 CPT1CQ8TCG5 803 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 TAS1R2Q8TE23 839 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 APOBEC4Q8WW27 367 aaKnown RBP7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 KCTD13Q8WZ19 329 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 MOCOSQ96EN8 888 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 IPO9Q96P70 1041 aaKnown RBP7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 DDX50Q9BQ39 737 aaKnown RBP7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 C1QTNF2Q9BXJ5 285 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 SRRTQ9BXP5 876 aaKnown RBP7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 HDAC8Q9BY41 377 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 NIF3L1Q9GZT8 377 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 LRRC4Q9HBW1 653 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 CASS4Q9NQ75 786 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 CNGB3Q9NQW8 809 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 TFIP11Q9UBB9 837 aaKnown RBP7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 ERRFI1Q9UJM3 462 aaPredicted RBP7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 APPL1Q9UKG1 709 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 TSPAN16Q9UKR8 245 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 PCDHGA3Q9Y5H0 932 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 SRPRBQ9Y5M8 271 aaKnown RBP7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 FADS3Q9Y5Q0 445 aa7.83□□□□□ -1.16
SMARCE1-217ENST00000580654 CHD5Q8TDI0 1954 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 LOC101059948A0A1B0GTJ6 334 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 A0A1B0GTL3 188 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 IGLON5A6NGN9 336 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 EFCAB7A8K855 629 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 K7ERQ8 282 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 PIK3R2O00459 728 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 RAD1O60671 282 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 LCP1P13796 627 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 IGFALSP35858 605 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 RECQLP46063 649 aaPredicted RBP7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 IRAK1P51617 712 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 MRPL49Q13405 166 aaKnown RBP7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 EIF2S3LQ2VIR3 472 aaKnown RBP7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 PHF19Q5T6S3 580 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 FAXCQ5TGI0 409 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 TMEM164Q5U3C3 297 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 TCTN3Q6NUS6 607 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 BRICD5Q6PL45 260 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 LVRNQ6Q4G3 990 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 ZC3H18Q86VM9 953 aaKnown RBP7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 RCBTB1Q8NDN9 531 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 UBA3Q8TBC4 463 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 DQX1Q8TE96 717 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms